Literature DB >> 7535249

Differential codon usage: a safeguard against inappropriate expression of specialized genes?

M H Saier1.   

Abstract

Recent work has suggested that rare codons are sometimes used for the regulation of specialized gene expression in bacteria. Moreover, the cellular levels of certain tRNAs may fluctuate with growth conditions. Evidence implicating such mechanisms in the control of photosynthesis in Rhodobacter, solventogenesis in Clostridium, sporulation in Streptomyces, and fimbrial phase variation in E. coli is summarized. It is suggested that such mechanisms will prove applicable to the control of numerous additional specialized functions, and that the empirical tools for testing this possibility are currently available.

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Year:  1995        PMID: 7535249     DOI: 10.1016/0014-5793(95)00185-c

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  12 in total

Review 1.  Genome dynamics and its impact on evolution of Escherichia coli.

Authors:  Ulrich Dobrindt; M Geddam Chowdary; G Krumbholz; J Hacker
Journal:  Med Microbiol Immunol       Date:  2010-05-06       Impact factor: 3.402

2.  LeuX tRNA-dependent and -independent mechanisms of Escherichia coli pathogenesis in acute cystitis.

Authors:  Thomas J Hannan; Indira U Mysorekar; Swaine L Chen; Jennifer N Walker; Jennifer M Jones; Jerome S Pinkner; Scott J Hultgren; Patrick C Seed
Journal:  Mol Microbiol       Date:  2007-11-25       Impact factor: 3.501

Review 3.  tRNA's modifications bring order to gene expression.

Authors:  Estella M Gustilo; Franck Ap Vendeix; Paul F Agris
Journal:  Curr Opin Microbiol       Date:  2008-04-02       Impact factor: 7.934

4.  DNA adenine methyltransferase (Dam) controls the expression of the cytotoxic enterotoxin (act) gene of Aeromonas hydrophila via tRNA modifying enzyme-glucose-inhibited division protein (GidA).

Authors:  Tatiana E Erova; Valeri G Kosykh; Jian Sha; Ashok K Chopra
Journal:  Gene       Date:  2012-02-23       Impact factor: 3.688

5.  tRNA(Arg) (fimU) and expression of SEF14 and SEF21 in Salmonella enteritidis.

Authors:  S C Clouthier; S K Collinson; A P White; P A Banser; W W Kay
Journal:  J Bacteriol       Date:  1998-02       Impact factor: 3.490

6.  Mapping of a YscY binding domain within the LcrH chaperone that is required for regulation of Yersinia type III secretion.

Authors:  Jeanette E Bröms; Petra J Edqvist; Katrin E Carlsson; Ake Forsberg; Matthew S Francis
Journal:  J Bacteriol       Date:  2005-11       Impact factor: 3.490

7.  Expression, purification and characterization of yellow grouper Epinephelus awoara regulator of G protein signaling 16 protein.

Authors:  Li Wang; Xinzhong Wu
Journal:  Fish Physiol Biochem       Date:  2011-01-20       Impact factor: 2.794

Review 8.  Strategies for achieving high-level expression of genes in Escherichia coli.

Authors:  S C Makrides
Journal:  Microbiol Rev       Date:  1996-09

9.  Nucleotide composition determines the role of translational efficiency in human genes.

Authors:  Binata Halder; Arup Kumar Malakar; Supriyo Chakraborty
Journal:  Bioinformation       Date:  2017-02-28

10.  Protein translation and cell death: the role of rare tRNAs in biofilm formation and in activating dormant phage killer genes.

Authors:  Rodolfo García-Contreras; Xue-Song Zhang; Younghoon Kim; Thomas K Wood
Journal:  PLoS One       Date:  2008-06-11       Impact factor: 3.240

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