Literature DB >> 7534508

Characterization of oligonucleotides and nucleic acids by mass spectrometry.

P A Limbach1, P F Crain, J A McCloskey.   

Abstract

The continued refinement of two recent methods for producing gas-phase ions, electrospray ionization and matrix-assisted laser desorption ionization, has resulted in new techniques for the rapid characterization of oligonucleotides by mass spectrometry. Using commercially available instruments, molecular mass measurements at the 20-mer level, with errors less than 2 Da, can now be made routinely in less than 15 min. Progress has also been achieved in the development of mass spectrometry for rapid sequencing of oligonucleotides smaller than 25 residues.

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Year:  1995        PMID: 7534508     DOI: 10.1016/0958-1669(95)80015-8

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  20 in total

1.  Identification of the mass-silent post-transcriptionally modified nucleoside pseudouridine in RNA by matrix-assisted laser desorption/ionization mass spectrometry.

Authors:  K G Patteson; L P Rodicio; P A Limbach
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

2.  Minimizing base loss and internal fragmentation in collisionally activated dissociation of multiply deprotonated RNA.

Authors:  Monika Taucher; Ulrike Rieder; Kathrin Breuker
Journal:  J Am Soc Mass Spectrom       Date:  2009-10-21       Impact factor: 3.109

3.  Mapping noncovalent ligand binding to stemloop domains of the HIV-1 packaging signal by tandem mass spectrometry.

Authors:  Kevin B Turner; Nathan A Hagan; Andrew S Kohlway; Daniele Fabris
Journal:  J Am Soc Mass Spectrom       Date:  2006-07-26       Impact factor: 3.109

4.  Intact microRNA analysis using high resolution mass spectrometry.

Authors:  Majlinda Kullolli; Emily Knouf; Maria Arampatzidou; Muneesh Tewari; Sharon J Pitteri
Journal:  J Am Soc Mass Spectrom       Date:  2013-10-31       Impact factor: 3.109

5.  Release factor RF-3 GTPase activity acts in disassembly of the ribosome termination complex.

Authors:  G Grentzmann; P J Kelly; S Laalami; M Shuda; M A Firpo; Y Cenatiempo; A Kaji
Journal:  RNA       Date:  1998-08       Impact factor: 4.942

6.  A liquid chromatography/electrospray mass spectrometric study on the post-transcriptional modification of tRNA.

Authors:  H Taniguchi; N Hayashi
Journal:  Nucleic Acids Res       Date:  1998-03-15       Impact factor: 16.971

Review 7.  Mass spectrometry of nucleotides and oligonucleotides.

Authors:  P Miketova; K H Schram
Journal:  Mol Biotechnol       Date:  1997-12       Impact factor: 2.695

8.  Characterization of peptide-oligonucleotide heteroconjugates by mass spectrometry.

Authors:  O N Jensen; S Kulkarni; J V Aldrich; D F Barofsky
Journal:  Nucleic Acids Res       Date:  1996-10-01       Impact factor: 16.971

9.  SOS: a simple interactive program for ab initio oligonucleotide sequencing by mass spectrometry.

Authors:  Jef Rozenski; James A McCloskey
Journal:  J Am Soc Mass Spectrom       Date:  2002-03       Impact factor: 3.109

10.  Solid phase synthesis of 5'-diphosphorylated oligoribonucleotides and their conversion to capped m7Gppp-oligoribonucleotides for use as primers for influenza A virus RNA polymerase in vitro.

Authors:  G G Brownlee; E Fodor; D C Pritlove; K G Gould; J J Dalluge
Journal:  Nucleic Acids Res       Date:  1995-07-25       Impact factor: 16.971

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