Literature DB >> 7544461

Solid phase synthesis of 5'-diphosphorylated oligoribonucleotides and their conversion to capped m7Gppp-oligoribonucleotides for use as primers for influenza A virus RNA polymerase in vitro.

G G Brownlee1, E Fodor, D C Pritlove, K G Gould, J J Dalluge.   

Abstract

We have synthesized four different 5'-diphosphorylated oligoribonucleotides, varying in length from 11 to 13 nucleotides by a new solid phase method. After deprotection and partial purification the 5'-diphosphorylated oligoribonucleotides could be converted to capped (m7Gppp) oligoribonucleotides using guanylyl transferase. Radiolabelled capped oligoribonucleotides acted as primers for the influenza A virus RNA polymerase in vitro. The solid phase method described here should also allow the addition of 5'-diphosphates to synthetic oligodeoxyribonucleotides and be capable automation.

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Year:  1995        PMID: 7544461      PMCID: PMC307087          DOI: 10.1093/nar/23.14.2641

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  14 in total

1.  Nucleotide sequences at the 5'termini of rabbit alpha and beta globin mRNA.

Authors:  R E Lockhard; U L Rajbhandary
Journal:  Cell       Date:  1976-12       Impact factor: 41.582

2.  Modification of the 5' end of mRNA. Association of RNA triphosphatase with the RNA guanylyltransferase-RNA (guanine-7-)methyltransferase complex from vaccinia virus.

Authors:  S Venkatesan; A Gershowitz; B Moss
Journal:  J Biol Chem       Date:  1980-02-10       Impact factor: 5.157

Review 3.  Viral RNA polymerases.

Authors:  A Ishihama; K Nagata
Journal:  CRC Crit Rev Biochem       Date:  1988

4.  The influenza virus panhandle is involved in the initiation of transcription.

Authors:  E Fodor; D C Pritlove; G G Brownlee
Journal:  J Virol       Date:  1994-06       Impact factor: 5.103

Review 5.  Genetic manipulation of negative-strand RNA virus genomes.

Authors:  A García-Sastre; P Palese
Journal:  Annu Rev Microbiol       Date:  1993       Impact factor: 15.500

6.  New synthetic routes to synthons suitable for 2'-O-allyloligoribonucleotide assembly.

Authors:  B S Sproat; A M Iribarren; R G Garcia; B Beijer
Journal:  Nucleic Acids Res       Date:  1991-02-25       Impact factor: 16.971

7.  Effect of excess water on the desilylation of oligoribonucleotides using tetrabutylammonium fluoride.

Authors:  R I Hogrefe; A P McCaffrey; L U Borozdina; E S McCampbell; M M Vaghefi
Journal:  Nucleic Acids Res       Date:  1993-10-11       Impact factor: 16.971

8.  Characterization of the RNA-fork model of virion RNA in the initiation of transcription in influenza A virus.

Authors:  E Fodor; D C Pritlove; G G Brownlee
Journal:  J Virol       Date:  1995-07       Impact factor: 5.103

9.  Biochemical studies on capped RNA primers identify a class of oligonucleotide inhibitors of the influenza virus RNA polymerase.

Authors:  T D Chung; C Cianci; M Hagen; B Terry; J T Matthews; M Krystal; R J Colonno
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-15       Impact factor: 11.205

10.  A unique cap(m7GpppXm)-dependent influenza virion endonuclease cleaves capped RNAs to generate the primers that initiate viral RNA transcription.

Authors:  S J Plotch; M Bouloy; I Ulmanen; R M Krug
Journal:  Cell       Date:  1981-03       Impact factor: 41.582

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  14 in total

1.  Mutagenic analysis of the 5' arm of the influenza A virus virion RNA promoter defines the sequence requirements for endonuclease activity.

Authors:  M B Leahy; D C Pritlove; L L Poon; G G Brownlee
Journal:  J Virol       Date:  2001-01       Impact factor: 5.103

2.  Practical and general synthesis of 5'-adenylated RNA (5'-AppRNA).

Authors:  Scott K Silverman
Journal:  RNA       Date:  2004-04       Impact factor: 4.942

3.  Synthesis of 5' cap-0 and cap-1 RNAs using solid-phase chemistry coupled with enzymatic methylation by human (guanine-N⁷)-methyl transferase.

Authors:  Yann Thillier; Etienne Decroly; François Morvan; Bruno Canard; Jean-Jacques Vasseur; Françoise Debart
Journal:  RNA       Date:  2012-02-14       Impact factor: 4.942

4.  The 2'-O-ribose methyltransferase for cap 1 of spliced leader RNA and U1 small nuclear RNA in Trypanosoma brucei.

Authors:  Jesse R Zamudio; Bidyottam Mittra; Silvie Foldynová-Trantírková; Gusti M Zeiner; Julius Lukes; Janusz M Bujnicki; Nancy R Sturm; David A Campbell
Journal:  Mol Cell Biol       Date:  2007-07-02       Impact factor: 4.272

5.  Cap ribose methylation of c-mos mRNA stimulates translation and oocyte maturation in Xenopus laevis.

Authors:  H Kuge; G G Brownlee; P D Gershon; J D Richter
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

6.  Hypermethylated cap 4 maximizes Trypanosoma brucei translation.

Authors:  Jesse R Zamudio; Bidyottam Mittra; David A Campbell; Nancy R Sturm
Journal:  Mol Microbiol       Date:  2009-06       Impact factor: 3.501

7.  A single amino acid mutation in the PA subunit of the influenza virus RNA polymerase inhibits endonucleolytic cleavage of capped RNAs.

Authors:  Ervin Fodor; Mandy Crow; Louise J Mingay; Tao Deng; Jane Sharps; Pierre Fechter; George G Brownlee
Journal:  J Virol       Date:  2002-09       Impact factor: 5.103

8.  Crystal structure of an avian influenza polymerase PA(N) reveals an endonuclease active site.

Authors:  Puwei Yuan; Mark Bartlam; Zhiyong Lou; Shoudeng Chen; Jie Zhou; Xiaojing He; Zongyang Lv; Ruowen Ge; Xuemei Li; Tao Deng; Ervin Fodor; Zihe Rao; Yingfang Liu
Journal:  Nature       Date:  2009-02-04       Impact factor: 49.962

9.  Amino acid residues in the N-terminal region of the PA subunit of influenza A virus RNA polymerase play a critical role in protein stability, endonuclease activity, cap binding, and virion RNA promoter binding.

Authors:  Koyu Hara; Florian I Schmidt; Mandy Crow; George G Brownlee
Journal:  J Virol       Date:  2006-08       Impact factor: 5.103

10.  Crystal structure of the RNA-dependent RNA polymerase from influenza C virus.

Authors:  Narin Hengrung; Kamel El Omari; Itziar Serna Martin; Frank T Vreede; Stephen Cusack; Robert P Rambo; Clemens Vonrhein; Gérard Bricogne; David I Stuart; Jonathan M Grimes; Ervin Fodor
Journal:  Nature       Date:  2015-10-26       Impact factor: 49.962

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