Literature DB >> 7528921

Triple-strand-forming methylphosphonate oligodeoxynucleotides targeted to mRNA efficiently block protein synthesis.

M A Reynolds1, L J Arnold, M T Almazan, T A Beck, R I Hogrefe, M D Metzler, S R Stoughton, B Y Tseng, T L Trapane, P O Ts'o.   

Abstract

Antisense oligonucleotides are ordinarily targeted to mRNA by double-stranded (Watson-Crick) base recognition but are seldom targeted by triple-stranded recognition. We report that certain all-purine methylphosphonate oligodeoxyribonucleotides (MPOs) form stable triple-stranded complexes with complementary (all-pyrimidine) RNA targets. Modified chloramphenicol acetyltransferase mRNA targets were prepared with complementary all-pyrimidine inserts (18-20 bp) located immediately 3' of the initiation codon. These modified chloramphenicol acetyltransferase mRNAs were used together with internal control (nontarget) mRNAs in a cell-free translation-arrest assay. Our data show that triple-strand-forming MPOs specifically inhibit protein synthesis in a concentration-dependent manner (> 90% at 1 microM). In addition, these MPOs specifically block reverse transcription in the region of their complementary polypyrimidine target sites.

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Year:  1994        PMID: 7528921      PMCID: PMC45452          DOI: 10.1073/pnas.91.26.12433

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

Review 1.  Specific regulation of gene expression by antisense, sense and antigene nucleic acids.

Authors:  C Hélène; J J Toulmé
Journal:  Biochim Biophys Acta       Date:  1990-06-21

2.  Antisense inhibition of ras p21 expression that is sensitive to a point mutation.

Authors:  E H Chang; P S Miller; C Cushman; K Devadas; K F Pirollo; P O Ts'o; Z P Yu
Journal:  Biochemistry       Date:  1991-08-27       Impact factor: 3.162

Review 3.  Circular dichroism and its empirical application to biopolymers.

Authors:  W C Johnson
Journal:  Methods Biochem Anal       Date:  1985

4.  Role of RNase H in hybrid-arrested translation by antisense oligonucleotides.

Authors:  R Y Walder; J A Walder
Journal:  Proc Natl Acad Sci U S A       Date:  1988-07       Impact factor: 11.205

5.  Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.

Authors:  D A Melton; P A Krieg; M R Rebagliati; T Maniatis; K Zinn; M R Green
Journal:  Nucleic Acids Res       Date:  1984-09-25       Impact factor: 16.971

6.  Comparative inhibition of rabbit globin mRNA translation by modified antisense oligodeoxynucleotides.

Authors:  C Cazenave; C A Stein; N Loreau; N T Thuong; L M Neckers; C Subasinghe; C Hélène; J S Cohen; J J Toulmé
Journal:  Nucleic Acids Res       Date:  1989-06-12       Impact factor: 16.971

7.  The stability, toxicity and effectiveness of unmodified and phosphorothioate antisense oligodeoxynucleotides in Xenopus oocytes and embryos.

Authors:  T M Woolf; C G Jennings; M Rebagliati; D A Melton
Journal:  Nucleic Acids Res       Date:  1990-04-11       Impact factor: 16.971

8.  Site-specific excision from RNA by RNase H and mixed-phosphate-backbone oligodeoxynucleotides.

Authors:  S Agrawal; S H Mayrand; P C Zamecnik; T Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-02       Impact factor: 11.205

Review 9.  DNA triple-helix formation: an approach to artificial gene repressors?

Authors:  L J Maher
Journal:  Bioessays       Date:  1992-12       Impact factor: 4.345

10.  Comparative circular dichroism and fluorescence studies of oligodeoxyribonucleotide and oligodeoxyribonucleoside methylphosphonate pyrimidine strands in duplex and triplex formation.

Authors:  D E Callahan; T L Trapane; P S Miller; P O Ts'o; L S Kan
Journal:  Biochemistry       Date:  1991-02-12       Impact factor: 3.162

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  6 in total

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Journal:  Chem Rev       Date:  2006-08       Impact factor: 60.622

2.  Recognition of DNA, RNA, and Proteins by Circular Oligonucleotides.

Authors:  Eric T Kool
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Authors:  Lou-sing Kan; Laura Pasternack; Ming-Tsair Wey; Yu-Yu Tseng; Dee-Hua Huang
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4.  Characterization of specific noncovalent complexes between guanidinium derivatives and single-stranded DNA by MALDI.

Authors:  Keiichiro Ohara; Michael Smietana; Jean-Jacques Vasseur
Journal:  J Am Soc Mass Spectrom       Date:  2006-01-27       Impact factor: 3.109

5.  Triple helix formation with purine-rich phosphorothioate-containing oligonucleotides covalently linked to an acridine derivative.

Authors:  J Lacoste; J C François; C Hélène
Journal:  Nucleic Acids Res       Date:  1997-05-15       Impact factor: 16.971

6.  Triplex formation with alpha anomers of purine-rich and pyrimidine-rich oligodeoxynucleotides.

Authors:  S B Noonberg; J C François; D Praseuth; A L Guieysse-Peugeot; J Lacoste; T Garestier; C Hélène
Journal:  Nucleic Acids Res       Date:  1995-10-25       Impact factor: 16.971

  6 in total

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