Literature DB >> 16895336

Probing enzyme phosphoester interactions by combining mutagenesis and chemical modification of phosphate ester oxygens.

James T Stivers1, Rajesh Nagarajan.   

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Year:  2006        PMID: 16895336      PMCID: PMC2729714          DOI: 10.1021/cr050317n

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


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  113 in total

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2.  Structural insights into the function of type IB topoisomerases.

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4.  Promiscuous catalysis by the tetrahymena group I ribozyme.

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Review 5.  Protein tyrosine phosphatases and signalling.

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6.  HIV-1-associated uracil DNA glycosylase activity controls dUTP misincorporation in viral DNA and is essential to the HIV-1 life cycle.

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7.  Hydrogen bonding in enzymatic catalysis: analysis of energetic contributions.

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Journal:  Methods Enzymol       Date:  1999       Impact factor: 1.600

8.  Mechanistic plasticity of DNA topoisomerase IB: phosphate electrostatics dictate the need for a catalytic arginine.

Authors:  Ligeng Tian; Christopher D Claeboe; Sidney M Hecht; Stewart Shuman
Journal:  Structure       Date:  2005-04       Impact factor: 5.006

9.  Structural flexibility in human topoisomerase I revealed in multiple non-isomorphous crystal structures.

Authors:  M R Redinbo; L Stewart; J J Champoux; W G Hol
Journal:  J Mol Biol       Date:  1999-09-24       Impact factor: 5.469

10.  Recognition of an unnatural difluorophenyl nucleotide by uracil DNA glycosylase.

Authors:  Yu Lin Jiang; Lynda M McDowell; Barbara Poliks; Daniel R Studelska; Chunyang Cao; Gregory S Potter; Jacob Schaefer; Fenhong Song; James T Stivers
Journal:  Biochemistry       Date:  2004-12-14       Impact factor: 3.162

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  13 in total

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Authors:  Jonathan K Lassila; Jesse G Zalatan; Daniel Herschlag
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2.  SAMHD1 is a single-stranded nucleic acid binding protein with no active site-associated nuclease activity.

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3.  Bacterial toxin RelE: a highly efficient ribonuclease with exquisite substrate specificity using atypical catalytic residues.

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Journal:  Biochemistry       Date:  2013-11-19       Impact factor: 3.162

4.  Unique catalytic mechanism of phosphatidylinositol-specific phospholipase C from Streptomyces antibioticus.

Authors:  Chuan Bai; Li Zhao; Ming-Daw Tsai; Karol S Bruzik
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5.  The effects of sulfur substitution for the nucleophile and bridging oxygen atoms in reactions of hydroxyalkyl phosphate esters.

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6.  Uracil DNA glycosylase: revisiting substrate-assisted catalysis by DNA phosphate anions.

Authors:  Jared B Parker; James T Stivers
Journal:  Biochemistry       Date:  2008-07-25       Impact factor: 3.162

7.  Transition State Charge Stabilization and Acid-Base Catalysis of mRNA Cleavage by the Endoribonuclease RelE.

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8.  Improved Performance of Anti-miRNA Oligonucleotides Using a Novel Non-Nucleotide Modifier.

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9.  Nicked-site substrates for a serine recombinase reveal enzyme-DNA communications and an essential tethering role of covalent enzyme-DNA linkages.

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10.  Antiplatelet activity, P2Y₁ and P2Y₁₂ inhibition, and metabolism in plasma of stereoisomers of diadenosine 5',5'″-P¹ ,P⁴-dithio-P²,P³-chloromethylenetetraphosphate.

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