Literature DB >> 7528202

The role of ribonuclease H in multicopy single-stranded DNA synthesis in retron-Ec73 and retron-Ec107 of Escherichia coli.

T Shimamoto1, M Shimada, M Inouye, S Inouye.   

Abstract

Bacterial reverse transcriptase is responsible for the synthesis of multicopy single-stranded DNA (msDNA). Reverse transcriptases from retron-Ec73 and retron-Ec107 do not contain an RNase H domain. Cellular RNase H is therefore considered to be required to make the mature form of msDNA. We found that RNase HI, but not RNase HII, is required for the production of the mature form of both msDNAs.

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Year:  1995        PMID: 7528202      PMCID: PMC176584          DOI: 10.1128/jb.177.1.264-267.1995

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  15 in total

Review 1.  Retrons and multicopy single-stranded DNA.

Authors:  M Inouye; S Inouye
Journal:  J Bacteriol       Date:  1992-04       Impact factor: 3.490

2.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.

Authors:  P Chomczynski; N Sacchi
Journal:  Anal Biochem       Date:  1987-04       Impact factor: 3.365

3.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

4.  Association of a retroelement with a P4-like cryptic prophage (retronphage phi R73) integrated into the selenocystyl tRNA gene of Escherichia coli.

Authors:  J Sun; M Inouye; S Inouye
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

5.  DNA sequence of the gene coding for Escherichia coli ribonuclease H.

Authors:  S Kanaya; R J Crouch
Journal:  J Biol Chem       Date:  1983-01-25       Impact factor: 5.157

6.  A pSC101-derived plasmid which shows no sequence homology to other commonly used cloning vectors.

Authors:  G Churchward; D Belin; Y Nagamine
Journal:  Gene       Date:  1984-11       Impact factor: 3.688

7.  Crystal structure at 3.5 A resolution of HIV-1 reverse transcriptase complexed with an inhibitor.

Authors:  L A Kohlstaedt; J Wang; J M Friedman; P A Rice; T A Steitz
Journal:  Science       Date:  1992-06-26       Impact factor: 47.728

8.  Retron-Ec107 is inserted into the Escherichia coli genome by replacing a palindromic 34bp intergenic sequence.

Authors:  P J Herzer; S Inouye; M Inouye
Journal:  Mol Microbiol       Date:  1992-02       Impact factor: 3.501

9.  Reverse transcriptases from bacterial retrons require specific secondary structures at the 5'-end of the template for the cDNA priming reaction.

Authors:  T Shimamoto; M Y Hsu; S Inouye; M Inouye
Journal:  J Biol Chem       Date:  1993-02-05       Impact factor: 5.157

10.  Origin and evolution of retroelements based upon their reverse transcriptase sequences.

Authors:  Y Xiong; T H Eickbush
Journal:  EMBO J       Date:  1990-10       Impact factor: 11.598

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  7 in total

Review 1.  Bacterial reverse transcriptase and msDNA.

Authors:  S A Rice; B C Lampson
Journal:  Virus Genes       Date:  1995       Impact factor: 2.332

2.  A mutational study of the site-specific cleavage of EC83, a multicopy single-stranded DNA (msDNA): nucleotides at the msDNA stem are important for its cleavage.

Authors:  K Kim; D Jeong; D Lim
Journal:  J Bacteriol       Date:  1997-10       Impact factor: 3.490

3.  Conformational preferences underlying reduced activity of a thermophilic ribonuclease H.

Authors:  Kate A Stafford; Nikola Trbovic; Joel A Butterwick; Robert Abel; Richard A Friesner; Arthur G Palmer
Journal:  J Mol Biol       Date:  2014-12-27       Impact factor: 5.469

4.  Validating Molecular Dynamics Simulations against Experimental Observables in Light of Underlying Conformational Ensembles.

Authors:  Matthew Carter Childers; Valerie Daggett
Journal:  J Phys Chem B       Date:  2018-06-21       Impact factor: 2.991

Review 5.  Retrons and their applications in genome engineering.

Authors:  Anna J Simon; Andrew D Ellington; Ilya J Finkelstein
Journal:  Nucleic Acids Res       Date:  2019-12-02       Impact factor: 16.971

6.  Retron reverse transcriptase termination and phage defense are dependent on host RNase H1.

Authors:  Christina Palka; Chloe B Fishman; Santi Bhattarai-Kline; Samuel A Myers; Seth L Shipman
Journal:  Nucleic Acids Res       Date:  2022-04-08       Impact factor: 16.971

7.  Contribution of reactive oxygen species to thymineless death in Escherichia coli.

Authors:  Yuzhi Hong; Liping Li; Gan Luan; Karl Drlica; Xilin Zhao
Journal:  Nat Microbiol       Date:  2017-10-02       Impact factor: 17.745

  7 in total

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