Literature DB >> 7526740

In vitro transcription: preparative RNA yields in analytical scale reactions.

I D Pokrovskaya1, V V Gurevich.   

Abstract

A new method of in vitro transcription with the use of SP6, T7, and T3 RNA polymerases is described. The method makes it possible to obtain, using only 1.6-2.6 micrograms of DNA template in as little as 50 microliters of transcription reaction in just 2 h, more than 200 micrograms of pure mRNA (with high translatability). Optimal conditions for the synthesis by all three RNA polymerases of transcripts 1500-1700 nt long and also for very long transcripts were determined. Reaction conditions that minimize DNA template or RNA polymerase requirements are also described, and these provide synthesis of either 1200-2100 RNA copies per DNA molecule or more than 5-15 micrograms of RNA per unit of RNA polymerase. Reactions can be easily scaled up to volumes of several milliliters, yielding up to 5.2 mg/ml of 1500- to 1700-nt-long RNA or up to 7.1 mg/ml of very long RNA.

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Year:  1994        PMID: 7526740     DOI: 10.1006/abio.1994.1360

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  37 in total

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Authors:  S C Agalarov; J R Williamson
Journal:  RNA       Date:  2000-03       Impact factor: 4.942

2.  Chemical and enzymatic synthesis of tRNAs for high-throughput crystallization.

Authors:  L D Sherlin; T L Bullock; T A Nissan; J J Perona; F J Lariviere; O C Uhlenbeck; S A Scaringe
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

3.  Practical and general synthesis of 5'-adenylated RNA (5'-AppRNA).

Authors:  Scott K Silverman
Journal:  RNA       Date:  2004-04       Impact factor: 4.942

4.  Kinetic analysis of ribosome-bound fluorescent proteins reveals an early, stable, cotranslational folding intermediate.

Authors:  Devaki A Kelkar; Amardeep Khushoo; Zhongying Yang; William R Skach
Journal:  J Biol Chem       Date:  2011-11-28       Impact factor: 5.157

5.  Structural organization of mRNA complexes with major core mRNP protein YB-1.

Authors:  Maxim A Skabkin; Olga I Kiselyova; Konstantin G Chernov; Alexey V Sorokin; Evgeniy V Dubrovin; Igor V Yaminsky; Victor D Vasiliev; Lev P Ovchinnikov
Journal:  Nucleic Acids Res       Date:  2004-10-19       Impact factor: 16.971

6.  Structure probing of tmRNA in distinct stages of trans-translation.

Authors:  Natalia Ivanova; Magnus Lindell; Michael Pavlov; Lovisa Holmberg Schiavone; E Gerhart H Wagner; Måns Ehrenberg
Journal:  RNA       Date:  2007-03-30       Impact factor: 4.942

7.  Incorporation of isotopic, fluorescent, and heavy-atom-modified nucleotides into RNAs by position-selective labeling of RNA.

Authors:  Yu Liu; Erik Holmstrom; Ping Yu; Kemin Tan; Xiaobing Zuo; David J Nesbitt; Rui Sousa; Jason R Stagno; Yun-Xing Wang
Journal:  Nat Protoc       Date:  2018-04-12       Impact factor: 13.491

8.  Ribosome display efficiently selects and evolves high-affinity antibodies in vitro from immune libraries.

Authors:  J Hanes; L Jermutus; S Weber-Bornhauser; H R Bosshard; A Plückthun
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-24       Impact factor: 11.205

9.  A 5'-3' exonuclease activity involved in forming the 3' products of histone pre-mRNA processing in vitro.

Authors:  T N Walther; T H Wittop Koning; D Schümperli; B Müller
Journal:  RNA       Date:  1998-09       Impact factor: 4.942

10.  The use of RNA probes for the analysis of gene expression.

Authors:  D Belin
Journal:  Mol Biotechnol       Date:  1997-04       Impact factor: 2.695

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