Literature DB >> 7521188

A method for the elimination of false positives generated by the mRNA differential display technique.

D Callard1, B Lescure, L Mazzolini.   

Abstract

The recently described mRNA differential display method provides an attractive tool for the isolation of genes showing regulated expression in a variety of systems. A key step in this technique consists of the isolation of PCR-synthesized radioactive cDNAs corresponding to differentially expressed mRNAs. Here, we show that the purified cDNAs remain contaminated with unrelated cDNA sequences that may lead to the artifactual isolation of false positives in the subsequent steps of the method. A powerful assay for the detection and elimination of this contaminating material, allowing the specific isolation of clones corresponding to the regulated genes identified by the differential display, is provided.

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Year:  1994        PMID: 7521188

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  22 in total

1.  Prevention of depurination during elution facilitates the reamplification of DNA from differential display gels.

Authors:  M R Frost; J A Guggenheim
Journal:  Nucleic Acids Res       Date:  1999-08-01       Impact factor: 16.971

2.  Two novel gastric cancer-associated genes identified by differential display.

Authors:  Han You; Bing Xiao; Da-Xiang Cui; Yong-Quan Shi; Dai-Ming Fan
Journal:  World J Gastroenterol       Date:  1998-08       Impact factor: 5.742

3.  A critical evaluation of differential display as a tool to identify genes involved in legume nodulation: looking back and looking forward.

Authors:  S Lievens; S Goormachtig; M Holsters
Journal:  Nucleic Acids Res       Date:  2001-09-01       Impact factor: 16.971

4.  Cloning of genes by mRNA differential display induced during the hypersensitive reaction of soybean after inoculation with Pseudomonas syringae pv. glycinea.

Authors:  K Seehaus; R Tenhaken
Journal:  Plant Mol Biol       Date:  1998-12       Impact factor: 4.076

5.  The maize An2 gene is induced by Fusarium attack and encodes an ent-copalyl diphosphate synthase.

Authors:  L J Harris; A Saparno; A Johnston; S Prisic; M Xu; S Allard; A Kathiresan; T Ouellet; R J Peters
Journal:  Plant Mol Biol       Date:  2005-12       Impact factor: 4.076

Review 6.  Differential display of mRNA.

Authors:  J S Zhang; E L Duncan; A C Chang; R R Reddel
Journal:  Mol Biotechnol       Date:  1998-10       Impact factor: 2.695

7.  Efficient reamplification of differential display products by transient ligation and thermal asymmetric PCR.

Authors:  S Bonnet; G Prévot; C Bourgouin
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

8.  Differential display of intestinal mRNAs regulated by dietary zinc.

Authors:  R K Blanchard; R J Cousins
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-09       Impact factor: 11.205

9.  Identification of differentially expressed cDNA sequences in ovaries of sexual and apomictic plants of Brachiaria brizantha.

Authors:  Júlio C M Rodrigues; Gláucia B Cabral; Diva M A Dusi; Luciane V de Mello; Daniel J Rigden; Vera T C Carneiro
Journal:  Plant Mol Biol       Date:  2003-12       Impact factor: 4.076

10.  Microsynteny between pea and Medicago truncatula in the SYM2 region.

Authors:  Gustavo Gualtieri; Olga Kulikova; Erik Limpens; Dong-Jin Kim; Douglas R Cook; Ton Bisselin; René Geurts
Journal:  Plant Mol Biol       Date:  2002-09       Impact factor: 4.076

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