Literature DB >> 7516439

Five viral peptide-HLA-A2 co-crystals. Simultaneous space group determination and X-ray data collection.

D N Garboczi1, D R Madden, D C Wiley.   

Abstract

We prepared and crystallized five complexes of the human histocompatibility molecule HLA-A2 with peptides derived from human immunodeficiency virus type 1, human T lymphotropic virus type 1, influenza A virus and hepatitis B virus proteins. Each HLA-A2 complex was refolded in vitro from insoluble proteins produced in bacteria; to crystallize, two of the complexes required seeding with microcrystals of another complex. Maintained at -160 degrees C, single co-crystals of each of the five peptide-HLA-A2 complexes yielded complete X-ray diffraction data sets to a resolution of approximately 2.5 A. After a sufficient number of diffraction peaks were acquired during data collection, the direct analysis of integrated intensities established the point group of the co-crystal, thus allowing an efficient data collection strategy to be designed. The subsequent examination of systematic absences revealed that the five peptide-HLA-A2 co-crystals formed in space groups P1, P2(1), or P2(1)2(1)2(1). Molecular replacement structure solutions yielded unambiguous protein electron density maps, thus confirming the space group determinations. The system of obtaining HLA-A2 co-crystal structures described here is applicable to other crystallographic problems where structures of several related molecules from uncharacterized single crystals are required.

Entities:  

Mesh:

Substances:

Year:  1994        PMID: 7516439     DOI: 10.1006/jmbi.1994.1398

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  3 in total

1.  T cell cross-reactivity and conformational changes during TCR engagement.

Authors:  Jean K Lee; Guillaume Stewart-Jones; Tao Dong; Karl Harlos; Kati Di Gleria; Lucy Dorrell; Daniel C Douek; P Anton van der Merwe; E Yvonne Jones; Andrew J McMichael
Journal:  J Exp Med       Date:  2004-12-06       Impact factor: 14.307

2.  Humidity control as a strategy for lattice optimization applied to crystals of HLA-A*1101 complexed with variant peptides from dengue virus.

Authors:  Pojchong Chotiyarnwong; Guillaume B Stewart-Jones; Michael J Tarry; Wanwisa Dejnirattisai; Christian Siebold; Michael Koch; David I Stuart; Karl Harlos; Prida Malasit; Gavin Screaton; Juthathip Mongkolsapaya; E Yvonne Jones
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-04-06

3.  Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.

Authors:  Curtis McMurtrey; Thomas Trolle; Tiffany Sansom; Soumya G Remesh; Thomas Kaever; Wilfried Bardet; Kenneth Jackson; Rima McLeod; Alessandro Sette; Morten Nielsen; Dirk M Zajonc; Ira J Blader; Bjoern Peters; William Hildebrand
Journal:  Elife       Date:  2016-01-29       Impact factor: 8.140

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.