Literature DB >> 7513083

Genes encoding glycine-rich Arabidopsis thaliana proteins with RNA-binding motifs are influenced by cold treatment and an endogenous circadian rhythm.

C D Carpenter1, J A Kreps, A E Simon.   

Abstract

We have characterized the expression of two members of a class of Arabidopsis thaliana glycine-rich, putative RNA-binding proteins that we denote Ccr1 and Ccr2. Southern blot analysis indicates that Ccr1 and Ccr2 are members of a small gene family. Both Ccr1 and Ccr2 mRNA levels were influenced by a circadian rhythm that has an unusual phase for plants, with maximal accumulation at 6:00 PM and minimal accumulation at 10:00 AM. The level of CCR1 protein, however, remained relatively constant throughout the cycle. The transcript accumulation patterns of the Ccr1 and Ccr2 genes differed considerably from conditions that affect the expression of similar genes from maize, sorghum, and carrot. Levels of Ccr1 and Ccr2 mRNAs were unchanged in wounded plants, increased at least 4-fold in cold-stressed plants, and decreased 2- to 3-fold in abscisic acid-treated plants. Ccr1 transcript levels decreased in response to drought, whereas Ccr2 transcript levels increased under the same conditions. Based on the presence of additional Ccr transcripts in dark-grown plants, we propose that Ccr transcripts may be subjected to a light- or dark-mediated regulation.

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Year:  1994        PMID: 7513083      PMCID: PMC160700          DOI: 10.1104/pp.104.3.1015

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  33 in total

Review 1.  Information contents and dinucleotide compositions of plant intron sequences vary with evolutionary origin.

Authors:  O White; C Soderlund; P Shanmugan; C Fields
Journal:  Plant Mol Biol       Date:  1992-09       Impact factor: 4.076

2.  Stress responses in maize: sequence analysis of cDNAs encoding glycine-rich proteins.

Authors:  L Didierjean; P Frendo; G Burkard
Journal:  Plant Mol Biol       Date:  1992-02       Impact factor: 4.076

3.  cDNA sequence of a virus-inducible, glycine-rich protein gene from rice.

Authors:  R X Fang; Z Pang; D M Gao; K Q Mang; N H Chua
Journal:  Plant Mol Biol       Date:  1991-12       Impact factor: 4.076

4.  Major determinants of the specificity of interaction between small nuclear ribonucleoproteins U1A and U2B'' and their cognate RNAs.

Authors:  D Scherly; W Boelens; N A Dathan; W J van Venrooij; I W Mattaj
Journal:  Nature       Date:  1990-06-07       Impact factor: 49.962

5.  Sequence of cDNA for a novel light-induced glycine-rich protein.

Authors:  R Kaldenhoff; G Richter
Journal:  Nucleic Acids Res       Date:  1989-04-11       Impact factor: 16.971

6.  A common RNA recognition motif identified within a defined U1 RNA binding domain of the 70K U1 snRNP protein.

Authors:  C C Query; R C Bentley; J D Keene
Journal:  Cell       Date:  1989-04-07       Impact factor: 41.582

7.  Molecular Cloning and Expression of cor (Cold-Regulated) Genes in Arabidopsis thaliana.

Authors:  R K Hajela; D P Horvath; S J Gilmour; M F Thomashow
Journal:  Plant Physiol       Date:  1990-07       Impact factor: 8.340

8.  Sex-lethal, a Drosophila sex determination switch gene, exhibits sex-specific RNA splicing and sequence similarity to RNA binding proteins.

Authors:  L R Bell; E M Maine; P Schedl; T W Cline
Journal:  Cell       Date:  1988-12-23       Impact factor: 41.582

9.  Alternatively spliced transcripts of the sex-determining gene tra-2 of Drosophila encode functional proteins of different size.

Authors:  H Amrein; T Maniatis; R Nöthiger
Journal:  EMBO J       Date:  1990-11       Impact factor: 11.598

10.  Function of the mammalian La protein: evidence for its action in transcription termination by RNA polymerase III.

Authors:  E Gottlieb; J A Steitz
Journal:  EMBO J       Date:  1989-03       Impact factor: 11.598

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  83 in total

1.  Microarray analysis of diurnal and circadian-regulated genes in Arabidopsis.

Authors:  R Schaffer; J Landgraf; M Accerbi; V Simon; M Larson; E Wisman
Journal:  Plant Cell       Date:  2001-01       Impact factor: 11.277

2.  Loss of the circadian clock-associated protein 1 in Arabidopsis results in altered clock-regulated gene expression.

Authors:  R M Green; E M Tobin
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

3.  Molecular characterization of nucleus-localized RNA-binding proteins from higher plants.

Authors:  Martin Landsberger; Zdravko J Lorković; Ralf Oelmüller
Journal:  Plant Mol Biol       Date:  2002-03       Impact factor: 4.076

4.  Genes that are uniquely stress regulated in salt overly sensitive (sos) mutants.

Authors:  Z Gong; H Koiwa; M A Cushman; A Ray; D Bufford; S Kore-eda; T K Matsumoto; J Zhu; J C Cushman; R A Bressan; P M Hasegawa
Journal:  Plant Physiol       Date:  2001-05       Impact factor: 8.340

5.  Coordination of Plant Metabolism and Development by the Circadian Clock.

Authors:  J. A. Kreps; S. A. Kay
Journal:  Plant Cell       Date:  1997-07       Impact factor: 11.277

Review 6.  Plants in a cold climate.

Authors:  Maggie Smallwood; Dianna J Bowles
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-07-29       Impact factor: 6.237

7.  The Arabidopsis circadian system.

Authors:  C Robertson McClung; Patrice A Salomé; Todd P Michael
Journal:  Arabidopsis Book       Date:  2002-03-27

8.  Computing gene expression data with a knowledge-based gene clustering approach.

Authors:  Bruce A Rosa; Sookyung Oh; Beronda L Montgomery; Jin Chen; Wensheng Qin
Journal:  Int J Biochem Mol Biol       Date:  2010-06-15

Review 9.  Spotlight on post-transcriptional control in the circadian system.

Authors:  Dorothee Staiger; Tino Köster
Journal:  Cell Mol Life Sci       Date:  2010-08-30       Impact factor: 9.261

10.  A glycine-rich RNA-binding protein affects gibberellin biosynthesis in Arabidopsis.

Authors:  B Löhr; C Streitner; A Steffen; T Lange; D Staiger
Journal:  Mol Biol Rep       Date:  2013-11-27       Impact factor: 2.316

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