Literature DB >> 7489500

In vivo facilitation of Tetrahymena group I intron splicing in Escherichia coli pre-ribosomal RNA.

F Zhang1, E S Ramsay, S A Woodson.   

Abstract

The observation that the large ribosomal RNA intron of Tetrahymena is spliced 20-50-fold more rapidly in vivo than in vitro (Brehm SL, Cech TR, 1983, Biochemistry 22:2390-2397; Bass BL, Cech TR, 1984, Nature 308:820-826) suggests facilitation of RNA folding in vivo. To determine whether a specific group I splicing factor is required in Tetrahymena, the intron was inserted into the analogous position of the Escherichia coli 23S rRNA. We report that the intron is rapidly excised from pre-rRNA in bacteria and that the magnitude of the in vivo rate enhancement is similar to that in Tetrahymena. These results demonstrate that a species-specific protein is not required. Instead, a common mechanism of assisting RNA folding is sufficient to accelerate the removal of self-splicing introns from ribosomal RNA.

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Year:  1995        PMID: 7489500      PMCID: PMC1369081     

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  24 in total

1.  Flanking sequences with an essential role in hydrolysis of a self-cleaving group I-like ribozyme.

Authors:  C Einvik; H Nielsen; R Nour; S Johansen
Journal:  Nucleic Acids Res       Date:  2000-05-15       Impact factor: 16.971

2.  Design and development of a catalytic ribonucleoprotein.

Authors:  S Atsumi; Y Ikawa; H Shiraishi; T Inoue
Journal:  EMBO J       Date:  2001-10-01       Impact factor: 11.598

3.  Effect of transcription on folding of the Tetrahymena ribozyme.

Authors:  Susan L Heilman-Miller; Sarah A Woodson
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

4.  Cotranscriptional folding kinetics of ribonucleic acid secondary structures.

Authors:  Peinan Zhao; Wenbing Zhang; Shi-Jie Chen
Journal:  J Chem Phys       Date:  2011-12-28       Impact factor: 3.488

5.  Self-splicing of a group I intron reveals partitioning of native and misfolded RNA populations in yeast.

Authors:  Scott A Jackson; Sujatha Koduvayur; Sarah A Woodson
Journal:  RNA       Date:  2006-10-24       Impact factor: 4.942

6.  Real-time control of the energy landscape by force directs the folding of RNA molecules.

Authors:  Pan T X Li; Carlos Bustamante; Ignacio Tinoco
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-16       Impact factor: 11.205

7.  Conformational heterogeneity and the determinants of tertiary stabilization in the hammerhead ribozyme from Dolichopoda cave crickets.

Authors:  Manami Roychowdhury-Saha; Sugata Roychowdhury; Donald H Burke
Journal:  RNA Biol       Date:  2011-06-29       Impact factor: 4.652

8.  Integration of the Tetrahymena group I intron into bacterial rRNA by reverse splicing in vivo.

Authors:  J Roman; S A Woodson
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

9.  Translational coupling by modulation of feedback repression in the IF3 operon of Escherichia coli.

Authors:  C Chiaruttini; M Milet; M Springer
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

10.  Intracellular folding of the Tetrahymena group I intron depends on exon sequence and promoter choice.

Authors:  Sujatha P Koduvayur; Sarah A Woodson
Journal:  RNA       Date:  2004-08-30       Impact factor: 4.942

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