Literature DB >> 7473760

Contribution of hydrophobic residues to the stability of human lysozyme: calorimetric studies and X-ray structural analysis of the five isoleucine to valine mutants.

K Takano1, K Ogasahara, H Kaneda, Y Yamagata, S Fujii, E Kanaya, M Kikuchi, M Oobatake, K Yutani.   

Abstract

In order to understand the contribution of hydrophobic residues to the conformational stability of human lysozyme, five Ile mutants (Ile --> Val) in the interior of the protein were constructed. The thermodynamic parameters characterizing the denaturation of these mutant proteins were determined by scanning calorimetry, and the three-dimensional structure of each mutant protein was solved at high resolution by X-ray crystallography. The thermodynamic analyses at 64.9 degrees C and at pH 2.7 revealed the following. (1) The stabilities of all the mutant proteins were decreased as compared with that of the wild-type protein. (2) The changes in the calorimetric enthalpies were larger than those in the Gibbs energies, and were compensated by entropy changes. (3) The destabilization mechanism of the mutant proteins differs, depending on the location of the mutation sites. X-ray analyses showed that the overall structures of all the mutant human lysozymes examined were identical to that of the wild-type protein, and only small structural rearrangements were observed locally around some of the mutation sites. The most striking change among the mutant proteins was found in the mutant protein, 159V, which contains a new water molecule in the cavity created by the mutation. The thermodynamic stabilities of the mutant proteins are discussed in light of the high-resolution X-ray structures of the wild-type and five mutant human lysozymes examined.

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Year:  1995        PMID: 7473760     DOI: 10.1006/jmbi.1995.0599

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  18 in total

1.  Interatomic potentials and solvation parameters from protein engineering data for buried residues.

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2.  Energetics of aliphatic deletions in protein cores.

Authors:  Marta Bueno; Luis A Campos; Jorge Estrada; Javier Sancho
Journal:  Protein Sci       Date:  2006-08       Impact factor: 6.725

3.  Role of protein cavities on unfolding volume change and on internal dynamics under pressure.

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Journal:  Biophys J       Date:  2006-11-01       Impact factor: 4.033

4.  Structure-based protocol for identifying mutations that enhance protein-protein binding affinities.

Authors:  Deanne W Sammond; Ziad M Eletr; Carrie Purbeck; Randall J Kimple; David P Siderovski; Brian Kuhlman
Journal:  J Mol Biol       Date:  2007-06-08       Impact factor: 5.469

5.  Structure of the Aeropyrum pernix L7Ae multifunctional protein and insight into its extreme thermostability.

Authors:  Mohammad Wadud Bhuiya; Jimmy Suryadi; Zholi Zhou; Bernard Andrew Brown
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-08-19

6.  Dependence of protein stability on the structure of the denatured state: free energy calculations of I56V mutation in human lysozyme.

Authors:  Y Sugita; A Kitao
Journal:  Biophys J       Date:  1998-11       Impact factor: 4.033

7.  Nonadditivity in conformational entropy upon molecular rigidification reveals a universal mechanism affecting folding cooperativity.

Authors:  Oleg K Vorov; Dennis R Livesay; Donald J Jacobs
Journal:  Biophys J       Date:  2011-02-16       Impact factor: 4.033

8.  The effect of introducing small cavities on the allosteric inhibition of phosphofructokinase from Bacillus stearothermophilus.

Authors:  Amy M Whitaker; Gregory D Reinhart
Journal:  Arch Biochem Biophys       Date:  2016-07-29       Impact factor: 4.013

9.  Protein Evolution is Potentially Governed by Protein Stability: Directed Evolution of an Esterase from the Hyperthermophilic Archaeon Sulfolobus tokodaii.

Authors:  Ryo Kurahashi; Satoshi Sano; Kazufumi Takano
Journal:  J Mol Evol       Date:  2018-04-20       Impact factor: 2.395

Review 10.  Slow unfolding of monomeric proteins from hyperthermophiles with reversible unfolding.

Authors:  Atsushi Mukaiyama; Kazufumi Takano
Journal:  Int J Mol Sci       Date:  2009-03-24       Impact factor: 6.208

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