Literature DB >> 7443522

Pyrimidine-specific chemical reactions useful for DNA sequencing.

C M Rubin, C W Schmid.   

Abstract

Potassium permanganate reacts selectively with thymidine residues in DNA (1) while hydroxylamine hydrochloride at pH 6 specifically attacks cytosine (2). We have adopted these reactions for use with the chemical sequencing method developed by Maxam and Gilbert (3).

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Year:  1980        PMID： 7443522      PMCID： PMC324374          DOI： 10.1093/nar/8.20.4613

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  4 in total

1.  The selective degradation of pyrimidines in nucleic acids by permanganate oxidation.

Authors:  H Hayatsu; T Ukita
Journal:  Biochem Biophys Res Commun       Date:  1967-11-30       Impact factor: 3.575

2.  Base-specific reactions useful for DNA sequencing: methylene blue--sensitized photooxidation of guanine and osmium tetraoxide modification of thymine.

Authors:  T Friedmann; D M Brown
Journal:  Nucleic Acids Res       Date:  1978-02       Impact factor: 16.971

3.  Partial nucleotide sequence of the 300-nucleotide interspersed repeated human DNA sequences.

Authors:  C M Rubin; C M Houck; P L Deininger; T Friedmann; C W Schmid
Journal:  Nature       Date:  1980-03-27       Impact factor: 49.962

4.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600
  4 in total
  122 in total

1.  Mapping of RNA polymerase on mammalian genes in cells and nuclei.

Authors:  J Mirkovitch; J E Darnell
Journal:  Mol Biol Cell       Date:  1992-10       Impact factor: 4.138

2.  Functional interaction of hybrid response elements with wild-type and mutant steroid hormone receptors.

Authors:  M Truss; G Chalepakis; E P Slater; S Mader; M Beato
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

3.  DNA sequencing of four bases using three lanes.

Authors:  M Nelson; J L Van Etten; R Grabherr
Journal:  Nucleic Acids Res       Date:  1992-03-25       Impact factor: 16.971

4.  Molecular architecture of a eukaryotic DNA replication terminus-terminator protein complex.

Authors:  Gregor Krings; Deepak Bastia
Journal:  Mol Cell Biol       Date:  2006-08-28       Impact factor: 4.272

5.  Detection of single base mismatches of thymine and cytosine residues by potassium permanganate and hydroxylamine in the presence of tetralkylammonium salts.

Authors:  J A Gogos; M Karayiorgou; H Aburatani; F C Kafatos
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

6.  Synthesis and properties of oligonucleotides containing 2'-deoxynebularine and 2'-deoxyxanthosine.

Authors:  R Eritja; D M Horowitz; P A Walker; J P Ziehler-Martin; M S Boosalis; M F Goodman; K Itakura; B E Kaplan
Journal:  Nucleic Acids Res       Date:  1986-10-24       Impact factor: 16.971

7.  Evidence that a capped oligoribonucleotide is the primer for duck hepatitis B virus plus-strand DNA synthesis.

Authors:  J M Lien; C E Aldrich; W S Mason
Journal:  J Virol       Date:  1986-01       Impact factor: 5.103

8.  Nucleotide sequence of the SUF2 frameshift suppressor gene of Saccharomyces cerevisiae.

Authors:  C M Cummins; T F Donahue; M R Culbertson
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

9.  Induction of tumors and generation of recovered sarcoma viruses by, and mapping of deletions in, two molecularly cloned src deletion mutants.

Authors:  L H Wang; B Edelstein; B J Mayer
Journal:  J Virol       Date:  1984-06       Impact factor: 5.103

10.  Isolation and characterization of a mouse cDNA clone that expresses mast-cell growth-factor activity in monkey cells.

Authors:  T Yokota; F Lee; D Rennick; C Hall; N Arai; T Mosmann; G Nabel; H Cantor; K Arai
Journal:  Proc Natl Acad Sci U S A       Date:  1984-02       Impact factor: 11.205
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