Literature DB >> 737289

Amide proton spin-lattice relaxation in polypeptides. A field-dependence study of the proton and nitrogen dipolar interactions in alumichrome.

M Llinás, M P Klein, K Wüthrich.   

Abstract

The proton nuclear magnetic resonance (NMR) spin-lattice relaxation of all six amides of deferriferrichrome and of various alumichromes dissolved in hexadeutero-dimethylsulfoxide have been investigated at 100, 220, and 360 MHz. We find that, depending on the type of residue (glycyl or ornithyl), the amide proton relaxation rates are rather uniform in the metal-free cyclohexapeptide. In contrast, the (1)H spinlattice relaxation times (T(1)'s) are distinct in the Al(3+)-coordination derivative. Similar patterns are observed in a number of isomorphic alumichrome homologues that differ in single-site residue substitutions, indicating that the spin-lattice relaxation rate is mainly determined by dipole-dipole interactions within a rigid molecular framework rather than by the specific primary structures. Analysis of the data in terms of (1)H-(1)H distances (r) calculated from X-ray coordinates yields a satisfactory linear fit between T(1) (-1) and Sigmar(-6) at the three magnetic fields. Considering the very sensitive r-dependence of T(1), the agreement gives confidence, at a quantitative level, both on the fitness of the crystallographic model to represent the alumichromes' solution conformation and on the validity of assuming isotropic rotational motion for the globular metallopeptides. An extra contribution to the amide proton T(1) (-1) is proposed to mainly originate from the (1)H-(14)N dipolar interaction: this was supported by comparison with measurements on an (15)N-enriched peptide. The nitrogen dipolar contribution to the peptide proton relaxation is discussed in the context of {(1)H}-(1)H nuclear Overhauser enhancement (NOE) studies because, especially at high fields, it can be dominant in determining the amide proton relaxation rates and hence result in a decreased effectiveness for the (1)H-(1)H dipolar mechanism to cause NOE's. From the slope and intersect values of T(1) (-1) vs. Sigmar(-6) linear plots, a number of independent estimates of tau(r), the rotational correlation time, were derived. These and the field-dependence of the T(1)'s yield a best estimate <tau(r)> approximately 0.37 ns, in good agreement with 0.38 ns [unk] <tau(r)> [unk] 0.41 ns, previously determined from (13)C and (15)N spin-lattice relaxation data.

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Year:  1978        PMID: 737289      PMCID: PMC1473506          DOI: 10.1016/S0006-3495(78)85424-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  12 in total

1.  On the conformation of cyclic iron-containing hexapeptides: the crystal and molecular structure of ferrichrysin.

Authors:  R Norrestam; B Stensland; C I Brändén
Journal:  J Mol Biol       Date:  1975-12-15       Impact factor: 5.469

2.  Peptide hydrogen bonding. Conformation dependence of the carbonyl carbon-13 nuclear magnetic resonance chemical shifts in ferrichrome. A study by 13C-[15N] Fourier double resonance spectroscopy1a.

Authors:  M Llinás; D M Wilson; M P Klein
Journal:  J Am Chem Soc       Date:  1977-10-12       Impact factor: 15.419

3.  Nitrogen-15 nuclear magnetic resonance spectrum of alumichrome. Detection by a double resonance Fourier transform technique.

Authors:  M Llinás; W J Horsley; M P Klein
Journal:  J Am Chem Soc       Date:  1976-11-24       Impact factor: 15.419

4.  A carbon-13 spin lattice relaxation study of alumichrome at 25.1 MHz and 90.5 MHz.

Authors:  M Llinás; W Meier; K Wüthrich
Journal:  Biochim Biophys Acta       Date:  1977-05-27

5.  Proton spin lattice relaxation time measurements at 90MHz and 270 MHz.

Authors:  H B Coates; K A McLaughlan; I D Campbell; C E McColl
Journal:  Biochim Biophys Acta       Date:  1973-05-17

6.  Solution conformation of the ferrichromes. A comparative proton magnetic resonance study of glycine- and serine-containing ferrichromes.

Authors:  M Llinás; M P Klein; J B Neilands
Journal:  J Mol Biol       Date:  1972-07-21       Impact factor: 5.469

7.  Peptide strain. Conformation dependence of the carbon-13 nuclear magnetic resonance chemical shifts in the ferrichromes.

Authors:  M Llinás; D M Wilson; J B Neilands
Journal:  J Am Chem Soc       Date:  1977-05-25       Impact factor: 15.419

8.  Experimental evidence for the role of cross-relaxation in proton nuclear magnetic resonance spin lattice relaxation time measurements in proteins.

Authors:  B D Sykes; W E Hull; G H Snyder
Journal:  Biophys J       Date:  1978-02       Impact factor: 4.033

9.  A nitrogen-15 spin-lattice relaxation study of alumichrome.

Authors:  M Llinás; K Wüthrich
Journal:  Biochim Biophys Acta       Date:  1978-01-25

10.  The influence of glycyl residues on the flexibility of peptide hormones in solution. A 13C-nuclear-magnetic-resonance study of luteinizing hormone-releasing hormone (luliberin) and its des-glycinamide10 N-ethylamide analog.

Authors:  R Deslauriers; G C Levy; W H McGregor; D Sarantakis; I C Smith
Journal:  Eur J Biochem       Date:  1977-05-16
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  5 in total

1.  CLOUDS, a protocol for deriving a molecular proton density via NMR.

Authors:  Alexander Grishaev; Miguel Llinás
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-14       Impact factor: 11.205

2.  Reminiscence: Miguel Llinás (1938-2020) : The Lasting Gifts of a Tireless Mentor.

Authors:  Juliette T J Lecomte
Journal:  Protein J       Date:  2021-06-05       Impact factor: 2.371

3.  The orientation and dynamics of substance P in lipid environments.

Authors:  D A Keire; M Kobayashi
Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

4.  Nuclear Overhauser effect and cross-relaxation rate determinations of dihedral and transannular interproton distances in the decapeptide tyrocidine A.

Authors:  M C Kuo; W A Gibbons
Journal:  Biophys J       Date:  1980-11       Impact factor: 4.033

5.  The Kringle of Life.

Authors:  Manuel Llinás
Journal:  Protein J       Date:  2021-06-16       Impact factor: 2.371

  5 in total

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