Literature DB >> 7340821

Factors that influence the translocation of the N-carboxybiotin moiety between the two sub-sites of pyruvate carboxylase.

G J Goodall, G S Baldwin, J C Wallace, D B Keech.   

Abstract

The active site of pyruvate carboxylase, like those of all biotin-dependent carboxylases, is believed to consist of two spatially distinct sub-sites with biotin acting as a mobile carboxy-group carrier oscillating between the two sub-sites. Some of the factors that influence the location and rate of movement of the N-carboxybiotin were studied. The rate of carboxylation of the alternative substrate, 2-oxobutyrate, was measured at 0 degrees C in an assay system where the isolated enzyme--[14C]carboxybiotin was the carboxy-group donor. The results are consistent with the hypothesis that the location of the carboxybiotin in the active site is determined by the presence of Mg2+, acetyl-CoA and the oxo acid substrate. The presence of Mg2+ favours the holding of the complex at the first sub-site, whereas alpha-oxo acids induce the complex to move to the second sub-site. At low concentrations pyruvate induces this movement but does not efficiently act as a carboxy-group acceptor; hydroxypyruvate, glyoxylate and oxamate, though not carboxylated, still induce the movement. The allosteric activator acetyl-CoA exerts only a slight stimulation on the rate of translocation to the second sub-site, and this stimulation arises from an increase in the dissociation constant for Mg2+.

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Year:  1981        PMID: 7340821      PMCID: PMC1163416          DOI: 10.1042/bj1990603

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  16 in total

1.  Physical and chemical studies on ceruloplasmin. V. Metabolic studies on sialic acid-free ceruloplasmin in vivo.

Authors:  A G Morell; R A Irvine; I Sternlieb; I H Scheinberg; G Ashwell
Journal:  J Biol Chem       Date:  1968-01-10       Impact factor: 5.157

2.  Pyruvate carboxylase. V. Interaction of the enzyme with adenosine triphosphate.

Authors:  M C Scrutton; M F Utter
Journal:  J Biol Chem       Date:  1965-10       Impact factor: 5.157

3.  An electron microscopic study of pyruvate carboxylase.

Authors:  N H Goss; P Y Dyer; D B Keech; J C Wallace
Journal:  J Biol Chem       Date:  1979-03-10       Impact factor: 5.157

4.  A reappraisal of the reaction pathway of pyruvate carboxylase.

Authors:  S B Easterbrook-Smith; J C Wallace; D B Keech
Journal:  Biochem J       Date:  1978-01-01       Impact factor: 3.857

5.  Microcentrifuge desalting: a rapid, quantitative method for desalting small amounts of protein.

Authors:  E Helmerhorst; G B Stokes
Journal:  Anal Biochem       Date:  1980-05-01       Impact factor: 3.365

6.  Pyruvate carboxylase. VII. A possible role for tightly bound manganese.

Authors:  A S Mildvan; M C Scrutton; M F Utter
Journal:  J Biol Chem       Date:  1966-08-10       Impact factor: 5.157

7.  [On the biochemical function of biotin. IX. The steric course in the carboxylation of propionyl-CoA].

Authors:  J Rétey; F Lynen
Journal:  Biochem Z       Date:  1965-08-06

8.  Studies on the intramolecular and intermolecular kinetic isotope effects in pyruvate carboxylase catalysis.

Authors:  Y F Cheung; C Walsh
Journal:  Biochemistry       Date:  1976-08-24       Impact factor: 3.162

9.  Intermolecular tritium transfer in the transcarboxylase reaction.

Authors:  I A Rose; E L O'Connell; F Solomon
Journal:  J Biol Chem       Date:  1976-02-10       Impact factor: 5.157

10.  Are carboxylations involving biotin concerted or nonconcerted?

Authors:  J Stubbe; S Fish; R H Abeles
Journal:  J Biol Chem       Date:  1980-01-10       Impact factor: 5.157

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  16 in total

Review 1.  Structure, function and regulation of pyruvate carboxylase.

Authors:  S Jitrapakdee; J C Wallace
Journal:  Biochem J       Date:  1999-05-15       Impact factor: 3.857

Review 2.  Regulation of the structure and activity of pyruvate carboxylase by acetyl CoA.

Authors:  Abdussalam Adina-Zada; Tonya N Zeczycki; Paul V Attwood
Journal:  Arch Biochem Biophys       Date:  2011-11-19       Impact factor: 4.013

3.  Probing the catalytic roles of Arg548 and Gln552 in the carboxyl transferase domain of the Rhizobium etli pyruvate carboxylase by site-directed mutagenesis.

Authors:  Saowapa Duangpan; Sarawut Jitrapakdee; Abdussalam Adina-Zada; Lindsay Byrne; Tonya N Zeczycki; Martin St Maurice; W Wallace Cleland; John C Wallace; Paul V Attwood
Journal:  Biochemistry       Date:  2010-04-20       Impact factor: 3.162

4.  Interaction between the biotin carboxyl carrier domain and the biotin carboxylase domain in pyruvate carboxylase from Rhizobium etli.

Authors:  Adam D Lietzan; Ann L Menefee; Tonya N Zeczycki; Sudhanshu Kumar; Paul V Attwood; John C Wallace; W Wallace Cleland; Martin St Maurice
Journal:  Biochemistry       Date:  2011-10-18       Impact factor: 3.162

5.  Novel insights into the biotin carboxylase domain reactions of pyruvate carboxylase from Rhizobium etli.

Authors:  Tonya N Zeczycki; Ann L Menefee; Abdussalam Adina-Zada; Sarawut Jitrapakdee; Kathy H Surinya; John C Wallace; Paul V Attwood; Martin St Maurice; W Wallace Cleland
Journal:  Biochemistry       Date:  2011-10-13       Impact factor: 3.162

6.  Activation and inhibition of pyruvate carboxylase from Rhizobium etli.

Authors:  Tonya N Zeczycki; Ann L Menefee; Sarawut Jitrapakdee; John C Wallace; Paul V Attwood; Martin St Maurice; W Wallace Cleland
Journal:  Biochemistry       Date:  2011-10-14       Impact factor: 3.162

7.  The role of biotin and oxamate in the carboxyltransferase reaction of pyruvate carboxylase.

Authors:  Adam D Lietzan; Yi Lin; Martin St Maurice
Journal:  Arch Biochem Biophys       Date:  2014-08-23       Impact factor: 4.013

8.  The carboxybiotin complex of chicken liver pyruvate carboxylase. A kinetic analysis of the effects of acetyl-CoA, Mg2+ ions and temperature on its stability and on its reaction with 2-oxobutyrate.

Authors:  P V Attwood; J C Wallace
Journal:  Biochem J       Date:  1986-04-15       Impact factor: 3.857

9.  The carboxybiotin complex of pyruvate carboxylase. A kinetic analysis of the effects of Mg2+ ions on its stability and on its reaction with pyruvate.

Authors:  P V Attwood; J C Wallace; D B Keech
Journal:  Biochem J       Date:  1984-04-01       Impact factor: 3.857

Review 10.  The enzymes of biotin dependent CO₂ metabolism: what structures reveal about their reaction mechanisms.

Authors:  Grover L Waldrop; Hazel M Holden; Martin St Maurice
Journal:  Protein Sci       Date:  2012-11       Impact factor: 6.725

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