Literature DB >> 7326332

Assembly of bacteriophage T7. Dimensions of the bacteriophage and its capsids.

R M Stroud, P Serwer, M J Ross.   

Abstract

The dimensions of bacteriophage T7 and T7 capsids have been investigated by small-angle x-ray scattering. Phage T7 behaves like a sphere of uniform density with an outer radius of 301 +/- 2 A (excluding the phage tail) and a calculated volume for protein plus nucleic acid of 1.14 +/- 0.05 x 10(-16) ml. The outer radius determined for T7 phage in solution is approximately 30% greater than the radius measured from electron micrographs, which indicates that considerable shrinkage occurs during preparation for electron microscopy. Capsids that have a phagelike envelope and do not contain DNA were obtained from lysates of T7-infected Escherichia coli (capsid II) and by separating the capsid component of T7 phage from the phage DNA by means of temperature shock (capsid IV). In both cases the peak protein density is at a radius of 275 A; the outer radius is 286 +/- 4 A, approximately 5% smaller than the envelope of T7 phage. The thickness of the envelope of capsid II is 22 +/- 4 A, consistent with the thickness of protein estimated to be 23 +/- 5 A in whole T7 phage, as seen on electron micrographs in which the internal DNA is positively stained. The volume in T7 phage available to package DNA is estimated to be 9.2 +/- 0.4 x 10(-17) ml. The packaged DNA adopts a regular packing with 23.6 A interplanar spacing between, DNA strands. The angular width of the 23.6 A reflection shows that the mean DNA-DNA spacing throughout the phage head is 27.5 +/- less than 2.2 A. A T7 precursor capsid (capsid I) expands when pelleted for x-ray scattering in the ultracentrifuge to essentially the same outer dimensions as for capsids II and IV. This expansion of capsid I can be prevented by fixing with glutaraldehyde; fixed capsid I has peak density at a radius of 247 A, 10% less than capsid II or IV.

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Year:  1981        PMID: 7326332      PMCID: PMC1327657          DOI: 10.1016/S0006-3495(81)84763-7

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  37 in total

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Authors:  S Casjens; J King
Journal:  Annu Rev Biochem       Date:  1975       Impact factor: 23.643

2.  Capsid geometry of bacteriophage T2: a freeze-etching study.

Authors:  D Branton; A Klug
Journal:  J Mol Biol       Date:  1975-03-15       Impact factor: 5.469

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Authors:  J W ANDEREGG; P H GEIL; W W BEEMAN; P KAESBERG
Journal:  Biophys J       Date:  1961-11       Impact factor: 4.033

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Authors:  P Serwer
Journal:  J Mol Biol       Date:  1975-03-05       Impact factor: 5.469

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Authors:  F W Studier
Journal:  Science       Date:  1972-04-28       Impact factor: 47.728

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Authors:  K E Richards; R C Williams; R Calendar
Journal:  J Mol Biol       Date:  1973-08-05       Impact factor: 5.469

7.  Molecular weights of coliphages and coliphage DNA. I. Measurement of the molecular weight of bacteriophage T7 by high-speed equilibrium centrifugation.

Authors:  F C Bancroft; D Freifelder
Journal:  J Mol Biol       Date:  1970-12-28       Impact factor: 5.469

8.  The genetics and physiology of bacteriophage T7.

Authors:  F W Studier
Journal:  Virology       Date:  1969-11       Impact factor: 3.616

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Journal:  Proc Natl Acad Sci U S A       Date:  1969-03       Impact factor: 11.205

Review 10.  Conformation of viral nucleic acids in situ.

Authors:  T I Tikchonenko
Journal:  Adv Virus Res       Date:  1969       Impact factor: 9.937

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  15 in total

1.  Assembly-associated structural changes of bacteriophage T7 capsids. Detection by use of a protein-specific probe.

Authors:  S A Khan; G A Griess; P Serwer
Journal:  Biophys J       Date:  1992-11       Impact factor: 4.033

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Authors:  G A Greiss; P Serwer; P M Horowitz
Journal:  Biophys J       Date:  1986-01       Impact factor: 4.033

3.  Hexagonally packed DNA within bacteriophage T7 stabilized by curvature stress.

Authors:  T Odijk
Journal:  Biophys J       Date:  1998-09       Impact factor: 4.033

4.  A high-throughput label-free nanoparticle analyser.

Authors:  Jean-Luc Fraikin; Tambet Teesalu; Christopher M McKenney; Erkki Ruoslahti; Andrew N Cleland
Journal:  Nat Nanotechnol       Date:  2011-03-06       Impact factor: 39.213

Review 5.  States of phage T3/T7 capsids: buoyant density centrifugation and cryo-EM.

Authors:  Philip Serwer; Elena T Wright; Borries Demeler; Wen Jiang
Journal:  Biophys Rev       Date:  2017-12-14

6.  Double-stranded DNA organization in bacteriophage heads: an alternative toroid-based model.

Authors:  N V Hud
Journal:  Biophys J       Date:  1995-10       Impact factor: 4.033

7.  Structure of bacteriophage T7. Small-angle X-ray and neutron scattering study.

Authors:  G Rontó; M M Agamalyan; G M Drabkin; L A Feigin; Y M Lvov
Journal:  Biophys J       Date:  1983-09       Impact factor: 4.033

8.  Heterogeneity of the procapsid of bacteriophage T3.

Authors:  P Serwer; R H Watson; S J Hayes
Journal:  J Virol       Date:  1985-07       Impact factor: 5.103

9.  Detection and characterization of agarose-binding, capsid-like particles produced during assembly of a bacteriophage T7 procapsid.

Authors:  P Serwer; R H Watson; S J Hayes
Journal:  J Virol       Date:  1982-05       Impact factor: 5.103

10.  A comprehensive analysis of filamentous phage display vectors for cytoplasmic proteins: an analysis with different fluorescent proteins.

Authors:  Nileena Velappan; Hugh E Fisher; Emanuele Pesavento; Leslie Chasteen; Sara D'Angelo; Csaba Kiss; Michelle Longmire; Peter Pavlik; Andrew R M Bradbury
Journal:  Nucleic Acids Res       Date:  2009-12-02       Impact factor: 16.971

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