Literature DB >> 7305946

The binding of monosaccharide inhibitors to hen egg-white lysozyme by proton magnetic resonance at 270 MHz and analysis by ring-current calculations.

S J Perkins, L N Johnson, D C Phillips, R A Dwek.   

Abstract

Studies of the binding of the four sugars alpha- and beta-N-acetyl-D-glucosamine (GlcNAc) and its alpha- and beta-methyl glycosides to hen egg-white lysozyme (EC 3.2.1.17) by means of high-resolution 1H n.m.r. at 270 MHz are reported. The details of the binding analyses are described in an Appendix. The results show that the sugars bind independently to more than one site in lysozyme. The apparent fully bound chemical shifts to the inhibitor proton signals show that, although the major binding modes are generally similar for the four sugars, the binding of alpha GlcNAc is distinct from that of alpha MeGlcNAc and beta MeClcNAc. The binding of beta GlcNAc is intermediate in character between these two modes. The observed shift changes of the inhibitor signals are correlated with the crystal structures of lysozyme-inhibitor complexes by the use of Johnson-Bovey ring-current calculations. Together with consideration of the chemical-shift anisotropy of the GlcNAc amide group, these suggest that GlcNAc-binding sites in solution are in subsites C and E. The calculations show also that the indole rings of Trp-62 and Trp-63 rotate towards subsite C on the binding of GlcNAc, whereas Trp-108 moves away slightly. These findings indicate a difference between the solution and tetragonal crystal forms of lysozyme-GlcNAc and lysozymes-beta MeGlcNAc complexes. In the crystal structure, binding of acetamido monosaccharides is only observed in subsite C, and binding in subsite E is prevented by crystal packing.

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Year:  1981        PMID: 7305946      PMCID: PMC1162636          DOI: 10.1042/bj1930553

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  25 in total

1.  Crystallographic studies of the activity of hen egg-white lysozyme.

Authors:  C C Blake; L N Johnson; G A Mair; A C North; D C Phillips; V R Sarma
Journal:  Proc R Soc Lond B Biol Sci       Date:  1967-04-18

Review 2.  The activity of lysozyme: an interim review of crystallographic and chemical evidence.

Authors:  L N Johnson; D C Phillips; J A Rupley
Journal:  Brookhaven Symp Biol       Date:  1968-06

3.  A nuclear magnetic resonance study of lysozyme inhibition. Effects of dimerization and pH on saccharide binding.

Authors:  J F Studebaker; B D Sykes; R Wien
Journal:  J Am Chem Soc       Date:  1971-09-08       Impact factor: 15.419

4.  A nuclear magnetic resonance study of association equilibria and enzyme-boud environments of N-acetyl-D-glucosamine anomers and lysozyme.

Authors:  F W Dahlquist; M A Raftery
Journal:  Biochemistry       Date:  1968-09       Impact factor: 3.162

5.  A transient nuclear magnetic resonance study of the kinetics of methyl N-acetyl-D-glucosaminide inhibition of lysozyme.

Authors:  B D Sykes
Journal:  Biochemistry       Date:  1969-03       Impact factor: 3.162

6.  A nuclear magnetic resonance study of the inhibition of lysozyme by N-acetyl-D-glucosamine and di-N-acetyl-D-glucosamine.

Authors:  B D Sykes; C Parravano
Journal:  J Biol Chem       Date:  1969-07-25       Impact factor: 5.157

7.  Association sites of lysozyme in solution. I. The active site.

Authors:  A J Sophianopoulos
Journal:  J Biol Chem       Date:  1969-06-25       Impact factor: 5.157

8.  Crystallographic studies of the active site of lysozyme. In: Molecular properties of drug receptors.

Authors:  C R Beddell; J Moult; D C Phillips
Journal:  Ciba Found Symp       Date:  1970

9.  Structure of hen egg-white lysozyme. A three-dimensional Fourier synthesis at 2 Angstrom resolution.

Authors:  C C Blake; D F Koenig; G A Mair; A C North; D C Phillips; V R Sarma
Journal:  Nature       Date:  1965-05-22       Impact factor: 49.962

10.  The use of nuclear magnetic resonance to describe relative modes of binding to lysozyme of homologous inhibitors and related substrates.

Authors:  M A Raftery; F W Dahlquist; S M Parsons; R G Wolcott
Journal:  Proc Natl Acad Sci U S A       Date:  1969-01       Impact factor: 11.205

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Authors:  N K Sauter; G D Glick; R L Crowther; S J Park; M B Eisen; J J Skehel; J R Knowles; D C Wiley
Journal:  Proc Natl Acad Sci U S A       Date:  1992-01-01       Impact factor: 11.205

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4.  The simultaneous binding of lanthanide and N-acetylglucosamine inhibitors to hen egg-white lysozyme in solution by 1H and 13C nuclear magnetic resonance.

Authors:  S J Perkins; L N Johnson; D C Phillips; R A Dwek
Journal:  Biochem J       Date:  1981-02-01       Impact factor: 3.857

5.  Drug screening boosted by hyperpolarized long-lived states in NMR.

Authors:  Roberto Buratto; Aurélien Bornet; Jonas Milani; Daniele Mammoli; Basile Vuichoud; Nicola Salvi; Maninder Singh; Aurélien Laguerre; Solène Passemard; Sandrine Gerber-Lemaire; Sami Jannin; Geoffrey Bodenhausen
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