Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 The molecular electrostatic potential and steric accessibility of A-DNA.

Literature DB >> 7301586

The molecular electrostatic potential and steric accessibility of A-DNA.

Abstract

The molecular electrostatic potential and steric accessibility of A-DNA are computed for base sequences (dG.dC)n and (dA.dT)n. An interpretation of the results in terms of the structure of A-DNA is provided and differences with respect to other forms of DNA, namely B-DNA and Z-DNA, are discussed.

Mesh：

Substances：
DNA

Year: 1981 PMID： 7301586 PMCID： PMC327467 DOI： 10.1093/nar/9.18.4677

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

15 in total

Review 1. Effects of the antibiotics netropsin and distamycin A on the structure and function of nucleic acids.

Authors: C Zimmer
Journal: Prog Nucleic Acid Res Mol Biol Date: 1975

2. The nature of the B-A transition of DNA in solution.

Authors: G Malenkov; L Minchenkova; E Minyat; A Schyolkina; V Ivanov
Journal: FEBS Lett Date: 1975-03-01 Impact factor: 4.124

3. Conformations of A,T-rich DNAs.

Authors: E Selsing; S Arnott
Journal: Nucleic Acids Res Date: 1976-10 Impact factor: 16.971

4. Conformations of satellite DNAs.

Authors: E Selsing; A G Leslie; S Arnott; J G Gall; D M Skinner; E M Southern; J H Spencer; K Harbers
Journal: Nucleic Acids Res Date: 1976-10 Impact factor: 16.971

5. Optimised parameters for A-DNA and B-DNA.

Authors: S Arnott; D W Hukins
Journal: Biochem Biophys Res Commun Date: 1972-06-28 Impact factor: 3.575

6. Solvent-accessible surfaces of nucleic acids.

Authors: C J Alden; S H Kim
Journal: J Mol Biol Date: 1979-08-15 Impact factor: 5.469

7. The electrostatic potential and steric accessibility of reactive sites within Z-DNA.

Authors: K Zakrzewska; R Lavery; A Pullman; B Pullman
Journal: Nucleic Acids Res Date: 1980-09-11 Impact factor: 16.971

8. High-salt d(CpGpCpG), a left-handed Z' DNA double helix.

Authors: H Drew; T Takano; S Tanaka; K Itakura; R E Dickerson
Journal: Nature Date: 1980-08-07 Impact factor: 49.962

9. The molecular electrostatic potential of the B-DNA helix. VI. The regions of the base pairs in poly (dG.dC) and poly (dA.dT).

Authors: B Pullman; D Perahia; D Cauchy
Journal: Nucleic Acids Res Date: 1979-08-24 Impact factor: 16.971

The molecular electrostatic potential and steric accessibility of A-DNA.

Review 1. Effects of the antibiotics netropsin and distamycin A on the structure and function of nucleic acids.

2. The nature of the B-A transition of DNA in solution.

3. Conformations of A,T-rich DNAs.

4. Conformations of satellite DNAs.

5. Optimised parameters for A-DNA and B-DNA.

6. Solvent-accessible surfaces of nucleic acids.

7. The electrostatic potential and steric accessibility of reactive sites within Z-DNA.

8. High-salt d(CpGpCpG), a left-handed Z' DNA double helix.

9. The molecular electrostatic potential of the B-DNA helix. VI. The regions of the base pairs in poly (dG.dC) and poly (dA.dT).

10. Left-handed DNA helices.

1. Ternary interactions of spermine with DNA: 4'-epiadriamycin and other DNA: anthracycline complexes.

2. Properties of pseudouridine N1 imino protons located in the major groove of an A-form RNA duplex.

3. Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.

4. The electrostatic field of DNA: the role of the nucleic acid conformation.

5. Recognition of the spliceosomal branch site RNA helix on the basis of surface and electrostatic features.

6. Ionic magnetic core-shell nanoparticles for DNA extraction.