Literature DB >> 7193480

Hypoxanthine in deoxyribonucleic acid: generation by heat-induced hydrolysis of adenine residues and release in free form by a deoxyribonucleic acid glycosylase from calf thymus.

P Karran, T Lindahl.   

Abstract

A slow conversion of adenine residues to hypoxanthine occurs in single-stranded DNA when heated in neutral aqueous buffers. The rate of this reaction at pH 7.6 and 110 degrees C is k = 4 x 10(-8) s-1, as determined by base analysis of heat-treated DNA that contains radioactively labeled adenine residues. It is proposed that adenine deamination is one of several forms of hydrolytic damage that may occur as spontaneous premutagenic lesions in DNA in vivo. Cell extracts from calf thymus and human fibroblasts contain a DNA glycosylase activity with specifically catalyzes the release of free hypoxanthine from DNA or polydeoxyribonucleotides that contain dIMP residues. Several properties of the purified enzyme from calf thymus are described: It has an approximate molecular weight of 31 000. No cofactors are required for activity. The enzymatic release of hypoxanthine occurs readily from double-stranded polydeoxyribonucleotides that have either thymine or cytosine residues in the complementary strand. Single-stranded polymers are 10-20-fold more slowly attacked, and there is no detectable cleavage of monomeric dIMP. Hypoxanthine is liberated from DNA directly as a free base. Thus, when poly(dI) x poly(dC) containing both [3H]-dIMP and [32P]dIMP residues was employed as the substrate, 3H-labeled hypoxanthine but no 32P-labeled material was released in ethanol-soluble form. The hypoxanthine-DNA glycosylase presumably acts in DNA repair by preventing deaminated adenine residues from being expressed as mu.

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Year:  1980        PMID: 7193480     DOI: 10.1021/bi00567a010

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  51 in total

1.  Interactions of the human, rat, Saccharomyces cerevisiae and Escherichia coli 3-methyladenine-DNA glycosylases with DNA containing dIMP residues.

Authors:  M Saparbaev; J C Mani; J Laval
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

2.  Genome, Epigenome, and Transcriptome Editing via Chemical Modification of Nucleobases in Living Cells.

Authors:  Brodie L Ranzau; Alexis C Komor
Journal:  Biochemistry       Date:  2018-12-12       Impact factor: 3.162

3.  Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA.

Authors:  M Stiller; R E Green; M Ronan; J F Simons; L Du; W He; M Egholm; J M Rothberg; S G Keates; S G Keats; N D Ovodov; E E Antipina; G F Baryshnikov; Y V Kuzmin; A A Vasilevski; G E Wuenschell; J Termini; M Hofreiter; V Jaenicke-Després; S Pääbo
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-25       Impact factor: 11.205

4.  A serum substitute for fed-batch culturing of hybridoma cells.

Authors:  Keisuke Shibuya; Ryoichi Haga; Masaru Namba
Journal:  Cytotechnology       Date:  2008-07-17       Impact factor: 2.058

Review 5.  An overview of chemical processes that damage cellular DNA: spontaneous hydrolysis, alkylation, and reactions with radicals.

Authors:  Kent S Gates
Journal:  Chem Res Toxicol       Date:  2009-11       Impact factor: 3.739

6.  Selective amplification of RNA utilizing the nucleotide analog dITP and Thermus thermophilus DNA polymerase.

Authors:  T Auer; J J Sninsky; D H Gelfand; T W Myers
Journal:  Nucleic Acids Res       Date:  1996-12-15       Impact factor: 16.971

7.  Selective prebiotic formation of RNA pyrimidine and DNA purine nucleosides.

Authors:  Jianfeng Xu; Václav Chmela; Nicholas J Green; David A Russell; Mikołaj J Janicki; Robert W Góra; Rafał Szabla; Andrew D Bond; John D Sutherland
Journal:  Nature       Date:  2020-06-03       Impact factor: 49.962

8.  Removal of deoxyinosine from the Escherichia coli chromosome as studied by oligonucleotide transformation.

Authors:  Bernard Weiss
Journal:  DNA Repair (Amst)       Date:  2007-11-05

9.  Human AP endonuclease 1 stimulates multiple-turnover base excision by alkyladenine DNA glycosylase.

Authors:  Michael R Baldwin; Patrick J O'Brien
Journal:  Biochemistry       Date:  2009-06-30       Impact factor: 3.162

10.  Hybridization properties of long nucleic acid probes for detection of variable target sequences, and development of a hybridization prediction algorithm.

Authors:  Christina Ohrmalm; Magnus Jobs; Ronnie Eriksson; Sultan Golbob; Amal Elfaitouri; Farid Benachenhou; Maria Strømme; Jonas Blomberg
Journal:  Nucleic Acids Res       Date:  2010-09-22       Impact factor: 16.971

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