Literature DB >> 7122243

The nucleotide sequences of 5S rRNAs from three ciliated protozoa.

T Kumazaki, H Hori, S Osawa, T Mita, T Higashinakagawa.   

Abstract

The nucleotide sequences of 5S rRNAs from three ciliated protozoa, Paramecium tetraurelia, Tetrahymena thermophila and Blepharisma japonicum have been determined. All of them are 120 nucleotides long and the sequence of probable tRNA binding site of position 41-44 is GAAC which is characteristic of the plant 5S rRNAs. The sequence similarity percents are 87% (Paramecium/Tetrahymena), 86% (Paramecium/Blepharisma) and 79% (Tetrahymena/Blepharisma), suggesting a close relationship of these three ciliates.

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Year:  1982        PMID： 7122243      PMCID： PMC320808          DOI： 10.1093/nar/10.14.4409

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  9 in total

1.  Nucleotide sequence of starfish initiator tRNA.

Authors:  Y Kuchino; M Kato; H Sugisaki; S Nishimura
Journal:  Nucleic Acids Res       Date:  1979-08-10       Impact factor: 16.971

2.  Direct chemical method for sequencing RNA.

Authors:  D A Peattie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

3.  The involvement of 5S RNA in the binding of tRNA to ribosomes.

Authors:  V A Erdmann; M Sprinzl; O Pongs
Journal:  Biochem Biophys Res Commun       Date:  1973-10-01       Impact factor: 3.575

4.  Evolutionary change in 5S RNA secondary structure and a phylogenic tree of 54 5S RNA species.

Authors:  H Hori; S Osawa
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

5.  The nucleotide sequence of 5S rRNA from a cellular slime mold Dictyostelium discoideum.

Authors:  H Hori; S Osawa; M Iwabuchi
Journal:  Nucleic Acids Res       Date:  1980-12-11       Impact factor: 16.971

Review 6.  Collection of published 5S and 5.8S RNA sequences and their precursors.

Authors:  V A Erdmann
Journal:  Nucleic Acids Res       Date:  1982-01-22       Impact factor: 16.971

7.  Nucleotide sequences of Acanthamoeba castellanii 5S and 5.8S ribosomal ribonucleic acids: phylogenetic and comparative structural analyses.

Authors:  R M MacKay; W F Doolittle
Journal:  Nucleic Acids Res       Date:  1981-07-24       Impact factor: 16.971

8.  Phy M: an RNase activity specific for U and A residues useful in RNA sequence analysis.

Authors:  H Donis-Keller
Journal:  Nucleic Acids Res       Date:  1980-07-25       Impact factor: 16.971

9.  Altered features in the secondary structure of Vicia faba 5.8s rRNA.

Authors:  R N Nazar; A G Wildeman
Journal:  Nucleic Acids Res       Date:  1981-10-24       Impact factor: 16.971
  9 in total
  10 in total

1.  Secondary structure of Tetrahymena thermophilia 5S ribosomal RNA as revealed by enzymatic digestion and microdensitometric analysis.

Authors:  B Sneath; C Vary; G Pavlakis; J Vournakis
Journal:  Nucleic Acids Res       Date:  1986-02-11       Impact factor: 16.971

2.  A promoter region mutation affecting replication of the Tetrahymena ribosomal DNA minichromosome.

Authors:  R C Gallagher; E H Blackburn
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

3.  Collection of published 5S, 5.8S and 4.5S ribosomal RNA sequences.

Authors:  V A Erdmann; J Wolters; E Huysmans; R De Wachter
Journal:  Nucleic Acids Res       Date:  1985       Impact factor: 16.971

4.  Phylogeny of protozoa deduced from 5S rRNA sequences.

Authors:  T Kumazaki; H Hori; S Osawa
Journal:  J Mol Evol       Date:  1983       Impact factor: 2.395

5.  RNA structure analysis using T2 ribonuclease: detection of pH and metal ion induced conformational changes in yeast tRNAPhe.

Authors:  C P Vary; J N Vournakis
Journal:  Nucleic Acids Res       Date:  1984-09-11       Impact factor: 16.971

6.  Collection of published 5S and 5.8S ribosomal RNA sequences.

Authors:  V A Erdmann; J Wolters; E Huysmans; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1984       Impact factor: 16.971

7.  Collection of published 5S and 5.8S ribosomal RNA sequences.

Authors:  V A Erdmann; E Huysmans; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1983-01-11       Impact factor: 16.971

8.  Unusual features of transcribed and translated regions of the histone H4 gene family of Tetrahymena thermophila.

Authors:  S Horowitz; J K Bowen; G A Bannon; M A Gorovsky
Journal:  Nucleic Acids Res       Date:  1987-01-12       Impact factor: 16.971

9.  5S and 5.8S ribosomal RNA evolution in the suborder Tetrahymenina (Ciliophora: Hymenostomatida).

Authors:  C T Van Bell
Journal:  J Mol Evol       Date:  1985       Impact factor: 2.395

10.  The nucleotide sequences of 5S rRNAs from a rotifer, Brachionus plicatilis, and two nematodes, Rhabditis tokai and Caenorhabditis elegans.

Authors:  T Kumazaki; H Hori; S Osawa; N Ishii; K Suzuki
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971
  10 in total

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