Literature DB >> 7061454

Intramolecular interactions of amino groups in 13C reductively methylated hen egg-white lysozyme.

T A Gerken, J E Jentoft, N Jentoft, D G Dearborn.   

Abstract

Reductive methylation of hen egg-white (HEW) lysozyme with [13C]formaldehyde and NaCNBH3 and subsequent 13C NMR spectroscopy reveal resonances for each of the mono- and dimethyl derivatives of the six lysyl epsilon-amino groups and the NH2 terminus. Each resonance has a unique chemical shift, pKa, and chemical shift change upon deprotonation. The assignment of the resonances arising from the N alpha,N-dimethyl and N alpha-monomethyl NH2 terminus has been made as have resonance assignments for the two lysyl residues which crystallographic studies indicate are involved in ion pair interactions (Imoto, T., Johnson, L. N., North, A. C. T., Phillips, D. C., and Rupley, J. A. (1972) in The Enzymes (Boyer, P. D., ed) 3rd Ed, Vol. 7, pp. 665-868, Academic Press, New York). One resonance, tentatively assigned to the lysine 1 (epsilon NH3+) which forms an ion pair with glutamic acid 7 (gamma COO-), has a highly perturbed chemical shift which shows a biphasic titration curve (N epsilon, N-dimethyl pKa values 10.0 and 2.6). A similar titration curve is observed for a N epsilon-monomethyl lysyl residue. The resonance for lysine 13 (epsilon NH3+), which forms an ion pair with the carboxyl terminus, leucine 129 (alpha COO-), has been assigned by removal of leucine 129 with carboxypeptidase whereupon only one pair of mono- and dimethyl lysyl resonances is greatly perturbed. The pKa of N epsilon,N-dimethyl lysine 13 is 9.3 in des-Arg-Leu-lysozyme in contrast to 9.8 for the intact enzyme. Thus, it appears that both of the intramolecular ion pairs predicted by x-ray crystallography exist in the solution structure of HEW lysozyme.

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Year:  1982        PMID: 7061454

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  18 in total

1.  13C NMR detects conformational change in the 100-kD membrane transporter ClC-ec1.

Authors:  Sherwin J Abraham; Ricky C Cheng; Thomas A Chew; Chandra M Khantwal; Corey W Liu; Shimei Gong; Robert K Nakamoto; Merritt Maduke
Journal:  J Biomol NMR       Date:  2015-01-29       Impact factor: 2.835

2.  Utilization of lysine ¹³C-methylation NMR for protein-protein interaction studies.

Authors:  Yoshikazu Hattori; Kyoko Furuita; Izuru Ohki; Takahisa Ikegami; Harumi Fukada; Masahiro Shirakawa; Toshimichi Fujiwara; Chojiro Kojima
Journal:  J Biomol NMR       Date:  2012-12-06       Impact factor: 2.835

3.  N epsilon,N epsilon-dimethyl-lysine cytochrome c as an NMR probe for lysine involvement in protein-protein complex formation.

Authors:  G R Moore; M C Cox; D Crowe; M J Osborne; F I Rosell; J Bujons; P D Barker; M R Mauk; A G Mauk
Journal:  Biochem J       Date:  1998-06-01       Impact factor: 3.857

4.  Detection of protein-ligand interactions by NMR using reductive methylation of lysine residues.

Authors:  Sherwin J Abraham; Susanne Hoheisel; Vadim Gaponenko
Journal:  J Biomol NMR       Date:  2008-09-26       Impact factor: 2.835

5.  Differences in lysine pKa values may be used to improve NMR signal dispersion in reductively methylated proteins.

Authors:  Sherwin J Abraham; Tomoyoshi Kobayashi; R John Solaro; Vadim Gaponenko
Journal:  J Biomol NMR       Date:  2009-03-12       Impact factor: 2.835

6.  Site-directed mutagenesis of alpha-tubulin. Reductive methylation studies of the Lys 394 region.

Authors:  J Szasz; M B Yaffe; H Sternlicht
Journal:  Biophys J       Date:  1993-03       Impact factor: 4.033

7.  Lysine methylation strategies for characterizing protein conformations by NMR.

Authors:  Sacha Thierry Larda; Michael P Bokoch; Ferenc Evanics; R Scott Prosser
Journal:  J Biomol NMR       Date:  2012-09-08       Impact factor: 2.835

Review 8.  Review of methods to assign the nuclear magnetic resonance peaks of reductively methylated proteins.

Authors:  Kevin J Roberson; Megan A Macnaughtan
Journal:  Anal Biochem       Date:  2014-08-29       Impact factor: 3.365

9.  Conserved Asp-137 is important for both structure and regulatory functions of cardiac α-tropomyosin (α-TM) in a novel transgenic mouse model expressing α-TM-D137L.

Authors:  Sumeyye Yar; Shamim A K Chowdhury; Robert T Davis; Minae Kobayashi; Michelle M Monasky; Sudarsan Rajan; Beata M Wolska; Vadim Gaponenko; Tomoyoshi Kobayashi; David F Wieczorek; R John Solaro
Journal:  J Biol Chem       Date:  2013-04-22       Impact factor: 5.157

10.  Ligand-specific regulation of the extracellular surface of a G-protein-coupled receptor.

Authors:  Michael P Bokoch; Yaozhong Zou; Søren G F Rasmussen; Corey W Liu; Rie Nygaard; Daniel M Rosenbaum; Juan José Fung; Hee-Jung Choi; Foon Sun Thian; Tong Sun Kobilka; Joseph D Puglisi; William I Weis; Leonardo Pardo; R Scott Prosser; Luciano Mueller; Brian K Kobilka
Journal:  Nature       Date:  2010-01-07       Impact factor: 49.962

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