Literature DB >> 7050910

Metabolism of dITP in HeLa cell extracts, incorporation into DNA by isolated nuclei and release of hypoxanthine from DNA by a hypoxanthine-DNA glycosylase activity.

B Myrnes, P H Guddal, H Krokan.   

Abstract

dITP may be generated from dATP by a slow, nonenzymatic hydrolysis. While [3H]dITP was degraded rapidly to [3H]deoxyinosine by HeLa cell nuclear extracts, no net degradation of [3H]dITP was observed in the presence of physiological concentrations of ATP, apparently because the extract contained deoxynucleoside diphosphate kinase activity that regenerated [3H]dITP from [3H]dIDP. Isolated HeLa cell nuclei, as well as partially purified DNA polymerase alpha, incorporated [3H]dITP into DNA at 50-60% of the rate of [3H]dGTP incorporation. No rapid release of the incorporated radioactivity was observed. The molecular weight of nascent DNA containing dIMP residues, however, decreased slightly after prolonged incubation in the presence of EDTA, suggesting that a repair process is initiated in dIMP-containing chromatin. Furthermore, release of free [3H]hypoxanthine from [3H]dIMP-containing DNA was detected after incubation with nuclear extracts in the presence of EDTA, suggesting the presence of hypoxanthine-DNA glycosylase activity in HeLa cell nuclei.

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Year:  1982        PMID: 7050910      PMCID: PMC320744          DOI: 10.1093/nar/10.12.3693

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  26 in total

1.  DNA synthesis in isolated HeLa cell nuclei. Optimalization of the system and characterization of the product.

Authors:  H Krokan; E Bjorklid; H Prydz
Journal:  Biochemistry       Date:  1975-09-23       Impact factor: 3.162

2.  Formation of Okazaki fragments in polyoma DNA synthesis caused by misincorporation of uracil.

Authors:  K Brynolf; R Eliasson; P Reichard
Journal:  Cell       Date:  1978-03       Impact factor: 41.582

3.  Formation of Okazaki pieces at the Escherichia coli replication fork in vitro.

Authors:  K R Thomas; P Manlapaz-Ramos; R Lundquist; B M Olivera
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

4.  Deoxyuridine triphosphatase of Escherichia coli. Purification, properties, and use as a reagent to reduce uracil incorporation into DNA.

Authors:  J Shlomai; A Kornberg
Journal:  J Biol Chem       Date:  1978-05-10       Impact factor: 5.157

5.  DNA glycosylases, endonucleases for apurinic/apyrimidinic sites, and base excision-repair.

Authors:  T Lindahl
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1979

6.  Preservation by glycerol of DNA synthetic capacity of isolated HeLa S(3) cell nuclei during long term storage at low temperature.

Authors:  E Wist; H Krokan
Journal:  Exp Cell Res       Date:  1978-10-15       Impact factor: 3.905

7.  Partial purification of deoxyuridine triphosphate nucleotidohydrolase and its effect on DNA synthesis in isolated HeLa cell nuclei.

Authors:  E Wist
Journal:  Biochim Biophys Acta       Date:  1979-11-22

8.  DNA synthesis with methylated poly(dC-dG) templates. Evidence for a competitive nature to miscoding by O(6)-methylguanine.

Authors:  P J Abbott; R Saffhill
Journal:  Biochim Biophys Acta       Date:  1979-03-28

9.  Synthesis and properties of O6-methyldeoxyguanylic acid and its copolymers with deoxycytidylic acid.

Authors:  J R Mehta; D B Ludlum
Journal:  Biochim Biophys Acta       Date:  1978-12-21

10.  A new deoxyuridine-5'-triphosphatase in Yoshida sarcoma cells involved in deoxyuridine 5'-triphosphate metabolism.

Authors:  T Arima; H Akiyoshi; S Fujii
Journal:  Cancer Res       Date:  1977-06       Impact factor: 12.701

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  18 in total

1.  Octamer-primed sequencing technology: effects of dNTP supplementation.

Authors:  A I Kraltcheva; S H Hardin
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

2.  Impact of base analogues within a CpG dinucleotide on the binding of DNA by the methyl-binding domain of MeCP2 and methylation by DNMT1.

Authors:  Victoria Valinluck Lao; Agus Darwanto; Lawrence C Sowers
Journal:  Biochemistry       Date:  2010-11-09       Impact factor: 3.162

3.  Kinetics of formation of hypoxanthine containing base pairs by HIV-RT: RNA template effects on the base substitution frequencies.

Authors:  M R Valentine; J Termini
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

4.  Biochemical characterization of a novel hypoxanthine/xanthine dNTP pyrophosphatase from Methanococcus jannaschii.

Authors:  J H Chung; J H Back; Y I Park; Y S Han
Journal:  Nucleic Acids Res       Date:  2001-07-15       Impact factor: 16.971

5.  Hypoxanthine incorporation is nonmutagenic in Escherichia coli.

Authors:  Brian Budke; Andrei Kuzminov
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

6.  NUDT16 is a (deoxy)inosine diphosphatase, and its deficiency induces accumulation of single-strand breaks in nuclear DNA and growth arrest.

Authors:  Teruaki Iyama; Nona Abolhassani; Daisuke Tsuchimoto; Mari Nonaka; Yusaku Nakabeppu
Journal:  Nucleic Acids Res       Date:  2010-04-12       Impact factor: 16.971

7.  Production of clastogenic DNA precursors by the nucleotide metabolism in Escherichia coli.

Authors:  Brian Budke; Andrei Kuzminov
Journal:  Mol Microbiol       Date:  2009-11-25       Impact factor: 3.501

8.  Preferential recognition of I.T base-pairs in the initiation of excision-repair by hypoxanthine-DNA glycosylase.

Authors:  G Dianov; T Lindahl
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

9.  Excision of hypoxanthine from DNA containing dIMP residues by the Escherichia coli, yeast, rat, and human alkylpurine DNA glycosylases.

Authors:  M Saparbaev; J Laval
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-21       Impact factor: 11.205

10.  NUDT16 and ITPA play a dual protective role in maintaining chromosome stability and cell growth by eliminating dIDP/IDP and dITP/ITP from nucleotide pools in mammals.

Authors:  Nona Abolhassani; Teruaki Iyama; Daisuke Tsuchimoto; Kunihiko Sakumi; Mizuki Ohno; Mehrdad Behmanesh; Yusaku Nakabeppu
Journal:  Nucleic Acids Res       Date:  2010-01-15       Impact factor: 16.971

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