Literature DB >> 7026797

The density distribution of gene loci over the genetic map of Escherichia coli: its structural, functional and evolutionary implications.

D A De Martelaere, A P Van Gool.   

Abstract

A quantitative analysis was carried out on the dispersion of gene loci over the E. coli genetic map. Therefore, the map was divided into regions characterized by an homogeneous gene density. This created a distribution pattern of gene loci that contained a symmetry axis located near to the origin of DNA replication. The pattern could be subdivided into a set of 22 functional domains containing gene loci whose products revealed a biochemical or functional relatedness. A correlation was found between the boundary positions of these domains and the distribution of F plasmid- and DNA insertion sites over the E. coli chromosome. The structural, functional and evolutionary implications of these findings are discussed.

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Year:  1981        PMID: 7026797     DOI: 10.1007/bf01734357

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  15 in total

Review 1.  Modes of gene transfer and recombination in bacteria.

Authors:  K B Low; D D Porter
Journal:  Annu Rev Genet       Date:  1978       Impact factor: 16.830

2.  Sensitivity of Escherichia coli to cephaloridine at different growth rates.

Authors:  E Mathys; A Van Gool
Journal:  J Bacteriol       Date:  1979-05       Impact factor: 3.490

3.  Compact Escherichia coli nucleoids in a highly supercoiled conformation.

Authors:  E C Materman; A P Van Gool
Journal:  J Bacteriol       Date:  1978-08       Impact factor: 3.490

4.  Map position of the replication origin on the E. coli chromosome.

Authors:  O Fayet; J M Louarn
Journal:  Mol Gen Genet       Date:  1978-06-01

5.  Prophage lambda at unusual chromosomal locations. II. Mutations induced by bacteriophage lambda in Escherichia coli K12.

Authors:  K Shimada; R A Weisberg; M E Gottesman
Journal:  J Mol Biol       Date:  1973-10-25       Impact factor: 5.469

6.  Proposal concerning mechanism of evolution of the genome of Escherichia coli.

Authors:  D Zipkas; M Riley
Journal:  Proc Natl Acad Sci U S A       Date:  1975-04       Impact factor: 11.205

Review 7.  Extrachromosomal elements as possible agents of adaptation and development.

Authors:  D Reanney
Journal:  Bacteriol Rev       Date:  1976-09

Review 8.  Linkage map of Escherichia coli K-12, edition 6.

Authors:  B J Bachmann; K B Low
Journal:  Microbiol Rev       Date:  1980-03

9.  Relationship between gene function and gene location in Escherichia coli.

Authors:  M Riley; L Solomon; D Zipkas
Journal:  J Mol Evol       Date:  1978-05-12       Impact factor: 2.395

10.  Cluster of ribosomal protein genes in Escherichia coli containing genes for proteins S6, S18, and L9.

Authors:  K Isono; M Kitakawa
Journal:  Proc Natl Acad Sci U S A       Date:  1978-12       Impact factor: 11.205

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  4 in total

1.  Detection of fundamental principles and a level of order for large-scale gene clustering on the Escherichia coli chromosome.

Authors:  R M Williamson; J Hetherington; J H Jackson
Journal:  J Mol Evol       Date:  1993-04       Impact factor: 2.395

2.  Gene density over the chromosome of Escherichia coli: frequency distribution, spatial clustering, and symmetry.

Authors:  J Jurka; M A Savageau
Journal:  J Bacteriol       Date:  1985-08       Impact factor: 3.490

3.  Ranges of control in the transcriptional regulation of Escherichia coli.

Authors:  Nikolaus Sonnenschein; Marc-Thorsten Hütt; Helga Stoyan; Dietrich Stoyan
Journal:  BMC Syst Biol       Date:  2009-12-24

4.  Locational distribution of gene functional classes in Arabidopsis thaliana.

Authors:  Michael C Riley; Amanda Clare; Ross D King
Journal:  BMC Bioinformatics       Date:  2007-03-30       Impact factor: 3.169

  4 in total

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