Literature DB >> 7019853

The sequence of the ribosomal 16S RNA from Proteus vulgaris. Sequence comparison with E. coli 16S RNA and its use in secondary model building.

P Carbon, J P Ebel, C Ehresmann.   

Abstract

The complete nucleotide sequence of the 16S RNA from Proteus vulgaris has been determined. The molecule (1544 nucleotides) shows 93% homology with the sequence of E. coli 16S RNA. Six methylated nucleotides have been localized in positions homologous to those observed in the E. coli RNA molecule. Both E. coli and P. vulgaris 16S RNA chains can be folded up into a common secondary structure scheme. Comparative sequence analysis of the two molecules has provided a valuable contribution to 16S RNA secondary structure model building.

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Year:  1981        PMID： 7019853      PMCID： PMC326848          DOI： 10.1093/nar/9.10.2325

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  17 in total

1.  Conservation of primary structure in 16S ribosomal RNA.

Authors:  C R Woese; G E Fox; L Zablen; T Uchida; L Bonen; K Pechman; B J Lewis; D Stahl
Journal:  Nature       Date:  1975-03-06       Impact factor: 49.962

2.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

3.  Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; M L Palmer; P J Kennedy; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

4.  Heterologous protein-RNA interactions in bacterial ribosomes.

Authors:  L Daya-Grosjean; M Geisser; G Stöffler; R A Garret
Journal:  FEBS Lett       Date:  1973-11-15       Impact factor: 4.124

5.  Nucleotide sequences from specific areas of the 16S and 23S ribosomal RNAs of E. coli.

Authors:  P Fellner
Journal:  Eur J Biochem       Date:  1969-11

6.  The determination of the primary structure of the 16S ribosomal RNA of Escherichia coli. III. Further studies.

Authors:  C Ehresmann; P Stiegler; P Fellner; J P Ebel
Journal:  Biochimie       Date:  1975       Impact factor: 4.079

7.  3'-terminal labelling of RNA with T4 RNA ligase.

Authors:  T E England; O C Uhlenbeck
Journal:  Nature       Date:  1978-10-12       Impact factor: 49.962

8.  [Isolation of highly purified ribonuclease from cobra (Naja oxiana) venom].

Authors:  S K Vasilenko; V C Ryte
Journal:  Biokhimiia       Date:  1975 May-Jun

9.  Comparative study of the 16S RNA's of Escherichia coli and Proteus vulgaris.

Authors:  J L Fischel; A Krol; C Ehresmann; P Fellner; J P Ebel
Journal:  Biochimie       Date:  1975       Impact factor: 4.079

10.  Mapping adenines, guanines, and pyrimidines in RNA.

Authors:  H Donis-Keller; A M Maxam; W Gilbert
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971
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  32 in total

Review 1.  Classification, identification, and clinical significance of Proteus, Providencia, and Morganella.

Authors:  C M O'Hara; F W Brenner; J M Miller
Journal:  Clin Microbiol Rev       Date:  2000-10       Impact factor: 26.132

2.  A BlnI restriction map of the Salmonella typhimurium LT2 genome.

Authors:  K K Wong; M McClelland
Journal:  J Bacteriol       Date:  1992-03       Impact factor: 3.490

Review 3.  Compilation of small ribosomal subunit RNA sequences.

Authors:  J M Neefs; Y Van de Peer; P De Rijk; A Goris; R De Wachter
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

4.  Sequence and characterization of pvuIIR, the PvuII endonuclease gene, and of pvuIIC, its regulatory gene.

Authors:  T Tao; R M Blumenthal
Journal:  J Bacteriol       Date:  1992-05       Impact factor: 3.490

5.  Compilation of small ribosomal subunit RNA sequences.

Authors:  J M Neefs; Y Van de Peer; L Hendriks; R De Wachter
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

6.  Is the 5S RNA a primitive ribosomal sequence?

Authors:  R N Nazar; W W Wong
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

7.  Phylogenetic characterization and in situ localization of the bacterial symbiont of shipworms (Teredinidae: Bivalvia) by using 16S rRNA sequence analysis and oligodeoxynucleotide probe hybridization.

Authors:  D L Distel; E F DeLong; J B Waterbury
Journal:  Appl Environ Microbiol       Date:  1991-08       Impact factor: 4.792

8.  Functional conservation near the 3' end of eukaryotic small subunit RNA: photochemical crosslinking of P site-bound acetylvalyl-tRNA to 18S RNA of yeast ribosomes.

Authors:  J Ofengand; P Gornicki; K Chakraburtty; K Nurse
Journal:  Proc Natl Acad Sci U S A       Date:  1982-05       Impact factor: 11.205

9.  Phylogeny of 54 representative strains of species in the family Pasteurellaceae as determined by comparison of 16S rRNA sequences.

Authors:  F E Dewhirst; B J Paster; I Olsen; G J Fraser
Journal:  J Bacteriol       Date:  1992-03       Impact factor: 3.490

10.  Neisseria weaveri sp. nov., formerly CDC group M-5, a gram-negative bacterium associated with dog bite wounds.

Authors:  B M Andersen; A G Steigerwalt; S P O'Connor; D G Hollis; R S Weyant; R E Weaver; D J Brenner
Journal:  J Clin Microbiol       Date:  1993-09       Impact factor: 5.948
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