Literature DB >> 7003554

The electrostatic molecular potential of yeast tRNAPhe. (I). The potential due to the phosphate backbone.

R Lavery, A Pullman, B Pullman.   

Abstract

We present a preliminary theoretical study of the electrostatic potential surrounding yeast tRNAPhe by computing the component of this potential due to all the 76 phosphate groups of the molecule. The general features of the results obtained are discussed and deductions concerning the binding of Mg2+ ions to the molecule in relation to the potential are presented.

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Year:  1980        PMID： 7003554      PMCID： PMC323973          DOI： 10.1093/nar/8.5.1061

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  13 in total

1.  Three-dimensional structure of a transfer rna in two crystal forms.

Authors:  J L Sussman; S Kim
Journal:  Science       Date:  1976-05-28       Impact factor: 47.728

2.  Atomic coordinates and molecular conformation of yeast phenylalanyl tRNA. An independent investigation.

Authors:  C D Stout; H Mizuno; J Rubin; T Brennan; S T Rao; M Sundaralingam
Journal:  Nucleic Acids Res       Date:  1976-04       Impact factor: 16.971

Review 3.  The structures and functions of transfer RNA.

Authors:  J P Goddard
Journal:  Prog Biophys Mol Biol       Date:  1977       Impact factor: 3.667

4.  Structural analysis of spermine and magnesium ion binding to yeast phenylalanine transfer RNA.

Authors:  G J Quigley; M M Teeter; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

5.  A crystallographic study of metal-binding to yeast phenylalanine transfer RNA.

Authors:  A Jack; J E Ladner; D Rhodes; R S Brown; A Klug
Journal:  J Mol Biol       Date:  1977-04-15       Impact factor: 5.469

6.  High-resolution x-ray diffraction patterns of crystalline transfer RNA that show helical regions.

Authors:  S H Kim; G Quigley; F L Suddath; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

7.  Crystallographic refinement of yeast phenylalanine transfer RNA at 2-5A resolution.

Authors:  A Jack; J E Ladner; A Klug
Journal:  J Mol Biol       Date:  1976-12-25       Impact factor: 5.469

Review 8.  Quantum-mechanical studies on the conformation of nucleic acids and their constituents.

Authors:  B Pullman; A Saran
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1976

9.  Interaction of nucleic acids. 8. Binding of magnesium ions by nucleic acids.

Authors:  C Sander; P O Ts'o
Journal:  J Mol Biol       Date:  1971-01-14       Impact factor: 5.469

10.  RNA-ligant interactions. (I) Magnesium binding sites in yeast tRNAPhe.

Authors:  S R Holbrook; J L Sussman; R W Warrant; G M Church; S H Kim
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971
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  3 in total

1.  The electrostatic molecular potential of tRNAPhe. IV. The potentials and steric accessibilities of sites associated with the bases.

Authors:  R Lavery; A Pullman; B Pullman; M de Oliveira
Journal:  Nucleic Acids Res       Date:  1980-11-11       Impact factor: 16.971

2.  The electrostatic potential and steric accessibility of reactive sites within Z-DNA.

Authors:  K Zakrzewska; R Lavery; A Pullman; B Pullman
Journal:  Nucleic Acids Res       Date:  1980-09-11       Impact factor: 16.971

3.  Fe.bleomycin as a probe of RNA conformation.

Authors:  C E Holmes; A T Abraham; S M Hecht; C Florentz; R Giegé
Journal:  Nucleic Acids Res       Date:  1996-09-01       Impact factor: 16.971
  3 in total

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