Literature DB >> 7002916

Single turnover kinetic studies of guanosine triphosphate hydrolysis and peptide formation in the elongation factor Tu-dependent binding of aminoacyl-tRNA to Escherichia coli ribosomes.

R C Thompson, D B Dix, J F Eccleston.   

Abstract

The rates of GTP hydrolysis and peptide formation during the reaction of Phe-tRNA . elongation factor Tu . GTP complex with acetyl-Phe-tRNA polyuridylate-programmed ribosomes have been measured. The GTPase reaction is second-order up to reactant concentrations of 0.2 microM and has a rate constant of 5 X 10(6) M-1 s-1 at 5 degrees C and 5 mM Mg2+, pH 7.2. The formation of peptide shows a lag phase and has a rate constant of 0.4 S-1 under these conditions. The results of a series of experiments between 5 degrees C and 25 degrees C show that GTP hydrolysis and peptide formation have Arrhenius activation energies of 13.1 and 15.3 kcal mol-1, respectively. The results indicate that these reactions proceed in vitro at rates comparable to those observed for protein biosynthesis in vivo, and that peptide bond formation occurs after GTP hydrolysis.

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Year:  1980        PMID: 7002916

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

1.  The accuracy of codon recognition by polypeptide release factors.

Authors:  D V Freistroffer; M Kwiatkowski; R H Buckingham; M Ehrenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

2.  Unusual codon bias occurring within insertion sequences in Escherichia coli.

Authors:  J G Lawrence; D L Hartl
Journal:  Genetica       Date:  1991       Impact factor: 1.082

Review 3.  Programmed translational frameshifting.

Authors:  P J Farabaugh
Journal:  Microbiol Rev       Date:  1996-03

4.  Elongation factor Tu.guanosine 3'-diphosphate 5'-diphosphate complex increases the fidelity of proofreading in protein biosynthesis: mechanism for reducing translational errors introduced by amino acid starvation.

Authors:  D B Dix; R C Thompson
Journal:  Proc Natl Acad Sci U S A       Date:  1986-04       Impact factor: 11.205

5.  Codon usage can affect efficiency of translation of genes in Escherichia coli.

Authors:  M Robinson; R Lilley; S Little; J S Emtage; G Yarranton; P Stephens; A Millican; M Eaton; G Humphreys
Journal:  Nucleic Acids Res       Date:  1984-09-11       Impact factor: 16.971

6.  Codon choice and gene expression: synonymous codons differ in their ability to direct aminoacylated-transfer RNA binding to ribosomes in vitro.

Authors:  L K Thomas; D B Dix; R C Thompson
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

7.  The accuracy of protein biosynthesis is limited by its speed: high fidelity selection by ribosomes of aminoacyl-tRNA ternary complexes containing GTP[gamma S].

Authors:  R C Thompson; A M Karim
Journal:  Proc Natl Acad Sci U S A       Date:  1982-08       Impact factor: 11.205

8.  Ribosomal frameshifting in the yeast retrotransposon Ty: tRNAs induce slippage on a 7 nucleotide minimal site.

Authors:  M F Belcourt; P J Farabaugh
Journal:  Cell       Date:  1990-07-27       Impact factor: 41.582

9.  Many of the conserved nucleotides of tRNA(Phe) are not essential for ternary complex formation and peptide elongation.

Authors:  I A Nazarenko; K M Harrington; O C Uhlenbeck
Journal:  EMBO J       Date:  1994-05-15       Impact factor: 11.598

  9 in total

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