Literature DB >> 6983070

Oligonucleotide-directed mutagenesis as a general and powerful method for studies of protein function.

G Dalbadie-McFarland, L W Cohen, A D Riggs, C Morin, K Itakura, J H Richards.   

Abstract

We have used oligonucleotide-directed mutagenesis to make a specific change in the beta-lactamase (EC 3.5.2.6) (ampicillin resistance) gene of the plasmid pBR322. Evidence suggests that the active site for this enzyme may include a serine-threonine dyad (residues 70 and 71). By priming in vitro DNA synthesis with a chemically synthesized 16-base oligodeoxyribonucleotide, we have inverted the Ser-Thr dyad to Thr-Ser and thereby generated a mutant with an ampicillin-sensitive phenotype. This "double-mismatch" method is relatively simple and also very general because detection of mutants is at the level of DNA and involves only colony hybridization. Accordingly, the procedure can be applied to any DNA sequence and does not depend on the phenotype of the mutant.

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Year:  1982        PMID: 6983070      PMCID: PMC347135          DOI: 10.1073/pnas.79.21.6409

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  6-beta-bromopenicillanic acid, a potent beta-lactamase inhibitor.

Authors:  R F Pratt; M J Loosemore
Journal:  Proc Natl Acad Sci U S A       Date:  1978-09       Impact factor: 11.205

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Local mutagenesis: a method for generating viral mutants with base substitutions in preselected regions of the viral genome.

Authors:  D Shortle; D Nathans
Journal:  Proc Natl Acad Sci U S A       Date:  1978-05       Impact factor: 11.205

4.  Efficient correction of a mutation by use of chemically synthesized DNA.

Authors:  A Razin; T Hirose; K Itakura; A D Riggs
Journal:  Proc Natl Acad Sci U S A       Date:  1978-09       Impact factor: 11.205

5.  Nucleotide sequence of the ampicillin resistance gene of Escherichia coli plasmid pBR322.

Authors:  J G Sutcliffe
Journal:  Proc Natl Acad Sci U S A       Date:  1978-08       Impact factor: 11.205

6.  A complementation analysis of the restriction and modification of DNA in Escherichia coli.

Authors:  H W Boyer; D Roulland-Dussoix
Journal:  J Mol Biol       Date:  1969-05-14       Impact factor: 5.469

7.  Directed selective pressure on a beta-lactamase to analyse molecular changes involved in development of enzyme function.

Authors:  A Hall; J R Knowles
Journal:  Nature       Date:  1976 Dec 23-30       Impact factor: 49.962

8.  Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.

Authors:  F Bolivar; R L Rodriguez; P J Greene; M C Betlach; H L Heyneker; H W Boyer; J H Crosa; S Falkow
Journal:  Gene       Date:  1977       Impact factor: 3.688

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Mutagenesis at a specific position in a DNA sequence.

Authors:  C A Hutchison; S Phillips; M H Edgell; S Gillam; P Jahnke; M Smith
Journal:  J Biol Chem       Date:  1978-09-25       Impact factor: 5.157

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  69 in total

1.  Use of oligonucleotide probes to study the relatedness of delta-endotoxin genes among Bacillus thuringiensis subspecies and strains.

Authors:  G Prefontaine; P Fast; P C Lau; M A Hefford; Z Hanna; R Brousseau
Journal:  Appl Environ Microbiol       Date:  1987-12       Impact factor: 4.792

2.  Three poliovirus 2B mutants exhibit noncomplementable defects in viral RNA amplification and display dosage-dependent dominance over wild-type poliovirus.

Authors:  K L Johnson; P Sarnow
Journal:  J Virol       Date:  1991-08       Impact factor: 5.103

3.  Gene synthesis, expression, and mutagenesis of the blue copper proteins azurin and plastocyanin.

Authors:  T K Chang; S A Iverson; C G Rodrigues; C N Kiser; A Y Lew; J P Germanas; J H Richards
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

4.  Active-site serine mutants of the Streptomyces albus G beta-lactamase.

Authors:  F Jacob; B Joris; J M Frère
Journal:  Biochem J       Date:  1991-08-01       Impact factor: 3.857

5.  Epidemiological study of Salmonella enteritidis strains of animal origin in Belgium.

Authors:  P Pohl; P Lintermans; M Marin; M Couturier
Journal:  Epidemiol Infect       Date:  1991-02       Impact factor: 2.451

6.  Alterations in PBP 1A essential-for high-level penicillin resistance in Streptococcus pneumoniae.

Authors:  A M Smith; K P Klugman
Journal:  Antimicrob Agents Chemother       Date:  1998-06       Impact factor: 5.191

7.  Detection of genes for heat-stable enterotoxin I in Escherichia coli strains isolated in Brazil.

Authors:  R Maas; R M Silva; T A Gomes; L R Trabulsi; W K Maas
Journal:  Infect Immun       Date:  1985-07       Impact factor: 3.441

8.  Introduction of restriction enzyme sites in protein-coding DNA sequences by site-specific mutagenesis not affecting the amino acid sequence: a computer program.

Authors:  R Arentzen; W C Ripka
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

9.  Point mutations in the middle of 16S ribosomal RNA of E. coli produced by deletion loop mutagenesis.

Authors:  C Zwieb; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

10.  Escherichia coli K-12 mutation that inactivates biodegradative threonine dehydratase by transposon Tn5 insertion.

Authors:  T J Goss; P Datta
Journal:  J Bacteriol       Date:  1984-06       Impact factor: 3.490

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