Literature DB >> 6929522

Deoxyribonucleotide pools, base pairing, and sequence configuration affecting bromodeoxyuridine- and 2-aminopurine-induced mutagenesis.

R L Hopkins, M F Goodman.   

Abstract

Despite recent experiments showing that BrdUrd-induced mutagenesis can be independent of the level of bromouracil (BrUra) substitution [Kaufman, E.R. & Davidson, R.L. (1978) Proc. Natl. Acad. Sci. USA 75, 4982-4986; Aebersold, P.M. (1976) Mutat. Res. 36, 357-362], BrUra.G base mispairs are a major determinant of mutagenesis. We propose that the experiments cited above are sensitive predominantly to G . C leads to A . T transitions driven by the immeasurably small but highly mutagenic substitution of BrUra for cytosine and not by the gross substitution of BrUra for thymine in DNA. More generally, we show how accumulated evidence suggests that both BrdUrd and 2-aminopurine have two mutagenic effects intracellularly: perturbation of normal deoxyribonucleoside triphosphate pools and analogue mispairs in DNA. We propose a molecular basis for various observations of normal exogenous deoxyribonucleosides as synergists and counteragents to base analogue mutagenesis. A model is proposed to explain the antipolarity of BrdUrd and 2-aminopurine mutagenesis--i.e., why mutants at hot spots for induction by one base analogue are usually hot spots for reversion by the other. It is concluded that the configuration of the neighboring nucleotides surrounding the base analogue mispair, and not the base analogue's preference for inducing A . T leads to G . C or G . C leads to A . T errors, is responsible for the antipolarity of BrdUrd and 2-aminopurine mutagenesis.

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Year:  1980        PMID: 6929522      PMCID: PMC348595          DOI: 10.1073/pnas.77.4.1801

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  61 in total

1.  The induction of mutants of bacteriophage T2 by 5-bromouracil. III. Nutritional and structural evidence regarding mutagenic action.

Authors:  R M LITMAN; A B PARDEE
Journal:  Biochim Biophys Acta       Date:  1960-07-29

2.  THE DIFFERENCE BETWEEN SPONTANEOUS AND BASE-ANALOGUE INDUCED MUTATIONS OF PHAGE T4.

Authors:  E Freese
Journal:  Proc Natl Acad Sci U S A       Date:  1959-04       Impact factor: 11.205

Review 3.  From deoxynucleotides to DNA synthesis.

Authors:  P Reichard
Journal:  Fed Proc       Date:  1978-01

4.  Enzymatic synthesis of deoxyribonucleic acid. 36. A proofreading function for the 3' leads to 5' exonuclease activity in deoxyribonucleic acid polymerases.

Authors:  D Brutlag; A Kornberg
Journal:  J Biol Chem       Date:  1972-01-10       Impact factor: 5.157

5.  Deoxycytidine reverses the suppression of pigmentation caused by 5-BrdUrd without changing the amount of 5-BrdUrd in DNA.

Authors:  R L Davidson; E R Kaufman
Journal:  Cell       Date:  1977-12       Impact factor: 41.582

6.  The influence of neighboring base pairs upon base-pair substitution mutation rates.

Authors:  R E Koch
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

7.  Mutagenesis of Chinese hamster cells is facilitated by thymidine and deoxycytidine.

Authors:  A R Peterson; J R Landolph; H Peterson; C Heidelberger
Journal:  Nature       Date:  1978-11-30       Impact factor: 49.962

8.  Effect of 2-aminopurine and 2-aminopurine 2'-deoxyriboside on nucleic acid synthesis in Ehrlich ascites cells in vitro.

Authors:  S Frederiksen
Journal:  Biochem Pharmacol       Date:  1965-05       Impact factor: 5.858

9.  The stereochemical basis of template function.

Authors:  H R Rackwitz; K H Scheit
Journal:  Eur J Biochem       Date:  1977-01-03

10.  Fidelity of replication of phage phi X174 DNA by DNA polymerase III holoenzyme: spontaneous mutation by misincorporation.

Authors:  A R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

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  18 in total

1.  DNA containing the base analogue 2-aminoadenine: preparation, use as hybridization probes and cleavage by restriction endonucleases.

Authors:  A Chollet; E Kawashima
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

2.  Dynamics of nucleotide incorporation: snapshots revealed by 2-aminopurine fluorescence studies.

Authors:  Chithra Hariharan; Linda B Bloom; Sandra A Helquist; Eric T Kool; Linda J Reha-Krantz
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

3.  Reduced in vivo mutagenesis by mutant herpes simplex DNA polymerase involves improved nucleotide selection.

Authors:  J D Hall; P A Furman; M H St Clair; C W Knopf
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

4.  Isolation and characterization of Escherichia coli antimutators. A new strategy to study the nature and origin of spontaneous mutations.

Authors:  A Quiñones; R Piechocki
Journal:  Mol Gen Genet       Date:  1985

5.  A fidelity assay using "dideoxy" DNA sequencing: a measurement of sequence dependence and frequency of forming 5-bromouracil X guanine base mispairs.

Authors:  R S Lasken; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

6.  Structural characterisation of the bromouracil.guanine base pair mismatch in a Z-DNA fragment.

Authors:  T Brown; G Kneale; W N Hunter; O Kennard
Journal:  Nucleic Acids Res       Date:  1986-02-25       Impact factor: 16.971

Review 7.  DNA mismatch repair (MMR)-dependent 5-fluorouracil cytotoxicity and the potential for new therapeutic targets.

Authors:  Long Shan Li; Julio C Morales; Martina Veigl; David Sedwick; Sheldon Greer; Mark Meyers; Mark Wagner; Richard Fishel; David A Boothman
Journal:  Br J Pharmacol       Date:  2009-09-23       Impact factor: 8.739

8.  Polynucleotide phosphorylase plays an important role in the generation of spontaneous mutations in Escherichia coli.

Authors:  Elinne Becket; Lawrence Tse; Madeline Yung; Alexander Cosico; Jeffrey H Miller
Journal:  J Bacteriol       Date:  2012-08-17       Impact factor: 3.490

9.  A mammalian-like DNA damage response of fission yeast to nucleoside analogs.

Authors:  Sarah A Sabatinos; Tara L Mastro; Marc D Green; Susan L Forsburg
Journal:  Genetics       Date:  2012-11-12       Impact factor: 4.562

10.  Mutagen Synergy: Hypermutability Generated by Specific Pairs of Base Analogs.

Authors:  Jocelyn Ang; Lisa Yun Song; Sara D'Souza; Irene L Hong; Rohan Luhar; Madeline Yung; Jeffrey H Miller
Journal:  J Bacteriol       Date:  2016-09-22       Impact factor: 3.490

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