Literature DB >> 5279518

The influence of neighboring base pairs upon base-pair substitution mutation rates.

R E Koch.   

Abstract

The 2-aminopurine-induced transition, A.T --> G.C, was studied at particular sites in bacteriophage T4 as a function of the nearby base-pair composition of the DNA. Changing a base pair changed the transition rate at the adjacent base pair up to 23-fold, and at the next base pair by a lesser amount. Destabilization was achieved by replacing an A.T base pair by a G.C base pair.

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Year:  1971        PMID： 5279518      PMCID： PMC389040          DOI： 10.1073/pnas.68.4.773

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  11 in total

1.  UAG suppressor coded by bacteriophage T4.

Authors:  W H. McClain
Journal:  FEBS Lett       Date:  1970-01-26       Impact factor: 4.124

2.  ON THE TOPOGRAPHY OF THE GENETIC FINE STRUCTURE.

Authors:  S Benzer
Journal:  Proc Natl Acad Sci U S A       Date:  1961-03       Impact factor: 11.205

3.  Mechanics of frameshift mutagenesis in bacteriophage T4: role of chromosome tips.

Authors:  D M Lindstrom; J W Drake
Journal:  Proc Natl Acad Sci U S A       Date:  1970-03       Impact factor: 11.205

4.  Genetic control of mutation rates in bacteriophageT4.

Authors:  J W Drake; E F Allen; S A Forsberg; R M Preparata; E O Greening
Journal:  Nature       Date:  1969-03-22       Impact factor: 49.962

5.  A strong suppressor specific for UGA.

Authors:  J F Sambrook; D P Fan; S Brenner
Journal:  Nature       Date:  1967-04-29       Impact factor: 49.962

6.  Genetic code: the 'nonsense' triplets for chain termination and their suppression.

Authors:  S Brenner; A O Stretton; S Kaplan
Journal:  Nature       Date:  1965-06-05       Impact factor: 49.962

7.  Synthetic spectroscopic models related to coenzymes and base pairs. II. Evidence for intramolecular base-base interactions in dinucleotide analog.

Authors:  D T Browne; J Eisinger; N J Leonard
Journal:  J Am Chem Soc       Date:  1968-12-18       Impact factor: 15.419

8.  Nonsense codons.

Authors:  A O Stretton; S Kaplan; S Brenner
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1966

9.  The structure of poly-5-methylcytidylic acid and its twin-stranded complex with poly-inosinic acid.

Authors:  W Szer; D Shugar
Journal:  J Mol Biol       Date:  1966-05       Impact factor: 5.469

10.  Studies on the pathway of incorporation of 2-aminopurine into the deoxyribonucleic acid of Escherichia coli.

Authors:  E G Rogan; M J Bessman
Journal:  J Bacteriol       Date:  1970-09       Impact factor: 3.490
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  22 in total

1.  The influence of nearest neighbors on the rate and pattern of spontaneous point mutations.

Authors:  R D Blake; S T Hess; J Nicholson-Tuell
Journal:  J Mol Evol       Date:  1992-03       Impact factor: 2.395

2.  Chaos and order in spontaneous mutation.

Authors:  John W Drake
Journal:  Genetics       Date:  2006-05       Impact factor: 4.562

3.  Templated mutagenesis in bacteriophage T4 involving imperfect direct or indirect sequence repeats.

Authors:  Gary E Schultz; John W Drake
Journal:  Genetics       Date:  2008-02-01       Impact factor: 4.562

Review 4.  The Clash of Macromolecular Titans: Replication-Transcription Conflicts in Bacteria.

Authors:  Kevin S Lang; Houra Merrikh
Journal:  Annu Rev Microbiol       Date:  2018-06-01       Impact factor: 15.500

5.  Selective amplification of variants of a complex repeating unit in DNA of a crustacean.

Authors:  N T Christie; D M Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  1980-05       Impact factor: 11.205

6.  [The extent of asymmetric distribution of DNA-bases in genes].

Authors:  R Piechocki; W Berg; A Bergmann
Journal:  Theor Appl Genet       Date:  1977-11       Impact factor: 5.699

7.  Asymmetric Context-Dependent Mutation Patterns Revealed through Mutation-Accumulation Experiments.

Authors:  Way Sung; Matthew S Ackerman; Jean-François Gout; Samuel F Miller; Emily Williams; Patricia L Foster; Michael Lynch
Journal:  Mol Biol Evol       Date:  2015-03-06       Impact factor: 16.240

8.  An analysis of replication errors made by a defective T4 DNA polymerase.

Authors:  F A de Vries; C J Swart-Idenburg; A de Waard
Journal:  Mol Gen Genet       Date:  1972

9.  Mutator gene studies in Escherichia coli: the mutS gene.

Authors:  E C Cox; G E Degnen; M L Scheppe
Journal:  Genetics       Date:  1972-12       Impact factor: 4.562

10.  Site specificity and variability in the mutator and antimutator effects of phage T4 gene 43 mutants.

Authors:  A Ronen; C Halevy; N Kass
Journal:  Genetics       Date:  1978-12       Impact factor: 4.562
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