Literature DB >> 6913864

The nucleotide sequence of the tRNAMMet from the archaebacterium Thermoplasma acidophilum.

M W Kilpatrick, R T Walker.   

Abstract

Using in vitro labelling techniques, a tRNAMMet from Thermoplasma acidophilum, a member of the Archaebacteriae, has been shown to have the sequence: pGCCGGG Gs4UGGCUCANCUGGAGGAGC m2(2)GCCGGACmUCAUt6AAUCCGGAGGUCUCGGG psi psi CmGAUCCCCGAUCCCGGCACCAOH. Despite the small genome size of this non-parasitic organism, eight modified nucleosides are present, one of which is typically eubacterial, one of which is typically eukaryotic and some of which appear to be unique to the archaebacteria. There is no close sequence homology between this tRNA and that of any other methionine tRNA so far sequenced (less than 70%) but it has almost 90% homology with the nucleotide sequence proposed by Eigen and Oswatitsch for the ancestral quasi-species.

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Year:  1981        PMID: 6913864      PMCID: PMC327441          DOI: 10.1093/nar/9.17.4387

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  8 in total

1.  Use of in vitro 32P labeling in the sequence analysis of nonradioactive tRNAs.

Authors:  M Silberklang; A M Gillum; U L RajBhandary
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

2.  The phylogeny of prokaryotes.

Authors:  G E Fox; E Stackebrandt; R B Hespell; J Gibson; J Maniloff; T A Dyer; R S Wolfe; W E Balch; R S Tanner; L J Magrum; L B Zablen; R Blakemore; R Gupta; L Bonen; B J Lewis; D A Stahl; K R Luehrsen; K N Chen; C R Woese
Journal:  Science       Date:  1980-07-25       Impact factor: 47.728

3.  Transfer-RNA: the early adaptor.

Authors:  M Eigen; R Winkler-Oswatitsch
Journal:  Naturwissenschaften       Date:  1981-05

4.  Compilation of tRNA sequences.

Authors:  D H Gauss; M Sprinzl
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

5.  A different approach to RNA sequencing.

Authors:  J Stanley; S Vassilenko
Journal:  Nature       Date:  1978-07-06       Impact factor: 49.962

6.  The nucleotide sequence of formylmethionine tRNA from Mycoplasma mycoides sp. capri.

Authors:  R T Walker; U L RajBhandary
Journal:  Nucleic Acids Res       Date:  1978-01       Impact factor: 16.971

7.  Mapping adenines, guanines, and pyrimidines in RNA.

Authors:  H Donis-Keller; A M Maxam; W Gilbert
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

8.  An improved direct RNA sequence method; its application to Vicia faba 5.8S ribosomal RNA.

Authors:  Y Tanaka; T A Dyer; G G Brownlee
Journal:  Nucleic Acids Res       Date:  1980-03-25       Impact factor: 16.971

  8 in total
  14 in total

1.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  The archaeal COG1901/DUF358 SPOUT-methyltransferase members, together with pseudouridine synthase Pus10, catalyze the formation of 1-methylpseudouridine at position 54 of tRNA.

Authors:  Kunal Chatterjee; Ian K Blaby; Patrick C Thiaville; Mrinmoyee Majumder; Henri Grosjean; Y Adam Yuan; Ramesh Gupta; Valérie de Crécy-Lagard
Journal:  RNA       Date:  2012-01-24       Impact factor: 4.942

3.  Distinct Modified Nucleosides in tRNATrp from the Hyperthermophilic Archaeon Thermococcus kodakarensis and Requirement of tRNA m2G10/m2 2G10 Methyltransferase (Archaeal Trm11) for Survival at High Temperatures.

Authors:  Akira Hirata; Takeo Suzuki; Tomoko Nagano; Daishiro Fujii; Mizuki Okamoto; Manaka Sora; Todd M Lowe; Tamotsu Kanai; Haruyuki Atomi; Tsutomu Suzuki; Hiroyuki Hori
Journal:  J Bacteriol       Date:  2019-10-04       Impact factor: 3.490

Review 4.  Structure, biosynthesis, and physicochemical properties of archaebacterial lipids.

Authors:  M De Rosa; A Gambacorta; A Gliozzi
Journal:  Microbiol Rev       Date:  1986-03

5.  Model approach of the breakthrough of a translation machine and the origin of the genetic code.

Authors:  U Lehmann; H Kuhn
Journal:  Orig Life       Date:  1984

Review 6.  Structure and evolution of organelle genomes.

Authors:  D C Wallace
Journal:  Microbiol Rev       Date:  1982-06

7.  Molecular selforganization and genesis of life.

Authors:  H Kuhn; J Waser
Journal:  Experientia       Date:  1983-08-15

8.  Sequences of halobacterial tRNAs and the paucity of U in the first position of their anticodons.

Authors:  X R Gu; K Nicoghosian; R J Cedergren; J T Wong
Journal:  Nucleic Acids Res       Date:  1983-08-25       Impact factor: 16.971

9.  Posttranscriptional modification of tRNA in thermophilic archaea (Archaebacteria).

Authors:  C G Edmonds; P F Crain; R Gupta; T Hashizume; C H Hocart; J A Kowalak; S C Pomerantz; K O Stetter; J A McCloskey
Journal:  J Bacteriol       Date:  1991-05       Impact factor: 3.490

10.  Identification of a radical SAM enzyme involved in the synthesis of archaeosine.

Authors:  Takashi Yokogawa; Yuichiro Nomura; Akihiro Yasuda; Hiromi Ogino; Keita Hiura; Saori Nakada; Natsuhisa Oka; Kaori Ando; Takuya Kawamura; Akira Hirata; Hiroyuki Hori; Satoshi Ohno
Journal:  Nat Chem Biol       Date:  2019-11-18       Impact factor: 15.040

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