Literature DB >> 6878037

Another method for specifying furanose ring puckering.

T Sato.   

Abstract

A set of pseudorotation coordinates is proposed for characterizing the puckering of the furanose ring. These are defined from the curvilinear displacements of the C1' and C4' atoms from the planar conformation. The present coordinates have some practical advantages over the ones currently used.

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Year:  1983        PMID: 6878037      PMCID: PMC326096          DOI: 10.1093/nar/11.14.4933

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  3 in total

1.  Conformational analysis of the sugar ring in nucleosides and nucleotides. A new description using the concept of pseudorotation.

Authors:  C Altona; M Sundaralingam
Journal:  J Am Chem Soc       Date:  1972-11-15       Impact factor: 15.419

2.  High-salt d(CpGpCpG), a left-handed Z' DNA double helix.

Authors:  H Drew; T Takano; S Tanaka; K Itakura; R E Dickerson
Journal:  Nature       Date:  1980-08-07       Impact factor: 49.962

3.  In vitro activation, infectivity, and production of endogenous type-C virus from OM rats.

Authors:  E T Lennette; N E Cremer
Journal:  J Natl Cancer Inst       Date:  1975-12       Impact factor: 13.506

  3 in total
  3 in total

1.  Accurate representation of B-DNA double helical structure with implicit solvent and counterions.

Authors:  Lihua Wang; Brian E Hingerty; A R Srinivasan; Wilma K Olson; Suse Broyde
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

2.  Improvement of DNA and RNA Sugar Pucker Profiles from Semiempirical Quantum Methods.

Authors:  Ming Huang; Timothy J Giese; Tai-Sung Lee; Darrin M York
Journal:  J Chem Theory Comput       Date:  2014-03-03       Impact factor: 6.006

3.  Solvent Effects and Aggregation Phenomena Studied by Vibrational Optical Activity and Molecular Dynamics: The Case of Pantolactone.

Authors:  Simone Ghidinelli; Sergio Abbate; Jun Koshoubu; Yasuyuki Araki; Takehiko Wada; Giovanna Longhi
Journal:  J Phys Chem B       Date:  2020-05-26       Impact factor: 2.991

  3 in total

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