Literature DB >> 6877386

Interior turns in globular proteins.

G D Rose, W B Young, L M Gierasch.   

Abstract

Reverse turns are specific sites in proteins at which the polypeptide chain changes its overall direction. This category of secondary structure enables the chain to turn a corner, and its frequent occurrence is the geometric basis for the ultimate globular shape of the protein. beta-Turns in particular are comprised of four consecutive residues with a stereochemistry that constrains the turn to be polar. In consequence, turns are almost always situated at the surface of the protein, in contact with solvent water. We have searched proteins of known structure and find that, on occasion, a turn may be buried within the hydrophobic interior of the molecule. In every instance of a buried turn, one or more solvent molecules were also found in a hydrogen-bonded complex with main-chain atoms of the turn residues. These bound water molecules appear to function as an integral part of the protein structure.

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Year:  1983        PMID: 6877386     DOI: 10.1038/304654a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  9 in total

1.  Role of flexibility and polarity as determinants of the hydration of internal cavities and pockets in proteins.

Authors:  Ana Damjanović; Jamie L Schlessman; Carolyn A Fitch; Angel E García; Bertrand García-Moreno E
Journal:  Biophys J       Date:  2007-06-29       Impact factor: 4.033

2.  Crystallographic study of hydration of an internal cavity in engineered proteins with buried polar or ionizable groups.

Authors:  Jamie L Schlessman; Colby Abe; Apostolos Gittis; Daniel A Karp; Michael A Dolan; Bertrand García-Moreno E
Journal:  Biophys J       Date:  2008-01-04       Impact factor: 4.033

3.  Hypothesis about the function of membrane-buried proline residues in transport proteins.

Authors:  C J Brandl; C M Deber
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

4.  The structure of bovine brain myelin proteolipid and its organization in myelin.

Authors:  R A Laursen; M Samiullah; M B Lees
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

5.  High apparent dielectric constants in the interior of a protein reflect water penetration.

Authors:  J J Dwyer; A G Gittis; D A Karp; E E Lattman; D S Spencer; W E Stites; B García-Moreno E
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

6.  Increasing protein conformational stability by optimizing beta-turn sequence.

Authors:  Saul R Trevino; Stephanie Schaefer; J Martin Scholtz; C Nick Pace
Journal:  J Mol Biol       Date:  2007-08-09       Impact factor: 5.469

7.  Structural coupling between FKBP12 and buried water.

Authors:  Szilvia Szep; Sheldon Park; Eric T Boder; Gregory D Van Duyne; Jeffery G Saven
Journal:  Proteins       Date:  2009-02-15

8.  Strain-specific and common epitopes of gonococcal pili.

Authors:  J B Rothbard; R Fernandez; G K Schoolnik
Journal:  J Exp Med       Date:  1984-07-01       Impact factor: 14.307

9.  Folding patterns of porin and bacteriorhodopsin.

Authors:  C Paul; J P Rosenbusch
Journal:  EMBO J       Date:  1985-06       Impact factor: 11.598

  9 in total

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