Literature DB >> 6840538

A major role for bacteriophage T4 DNA polymerase in frameshift mutagenesis.

L S Ripley, N B Shoemaker.   

Abstract

T4 DNA polymerase strongly influences the frequency and specificity of frameshift mutagenesis. Fifteen of 19 temperature-sensitive alleles of the DNA polymerase gene substantially influenced the reversion frequencies of frameshift mutations measured in the T4 rII genes. Most polymerase mutants increased frameshift frequencies, but a few alleles (previously noted as antimutators for base substitution mutations) decreased the frequencies of certain frameshifts while increasing the frequencies of others. The various patterns of enhanced or decreased frameshift mutation frequencies suggest that T4 DNA polymerase is likely to play a variety of roles in the metabolic events leading to frameshift mutation. A detailed genetic study of the specificity of the mutator properties of three DNA polymerase alleles (tsL56, tsL98 and tsL88) demonstrated that each produces a distinctive frameshift spectrum. Differences in frameshift frequencies at similar DNA sequences within the rII genes, the influence of mutant polymerase alleles on these frequencies, and the presence or absence of the dinucleotide sequence associated with initiation of Okazaki pieces at the frameshift site has led us to suggest that the discontinuities associated with discontinuous DNA replication may contribute to spontaneous frameshift mutation frequencies in T4.

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Year:  1983        PMID: 6840538      PMCID: PMC1202028     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  10 in total

1.  Probing DNA replication mechanisms with the T4 bacteriophage in vitro system.

Authors:  C C Liu; R L Burke; U Hibner; J Barry; B Alberts
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

2.  Correlation between genetic and nucleotide distances in a bacteriophage T4 transfer, RNA gene.

Authors:  M M Comer
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

3.  Transposition of the Lac region of E. coli.

Authors:  J R Beckwith; E R Signer; W Epstein
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1966

4.  Genetic control of mutation rates in bacteriophageT4.

Authors:  J W Drake; E F Allen; S A Forsberg; R M Preparata; E O Greening
Journal:  Nature       Date:  1969-03-22       Impact factor: 49.962

5.  Properties of bacteriophage T4 mutants defective in DNA polymerase.

Authors:  E F Allen; I Albrecht; J W Drake
Journal:  Genetics       Date:  1970-06       Impact factor: 4.562

Review 6.  Discontinuous DNA replication.

Authors:  T Ogawa; T Okazaki
Journal:  Annu Rev Biochem       Date:  1980       Impact factor: 23.643

7.  Control of mutation frequency by bacteriophage T4 DNA polymerase. II. Accuracy of nucleotide selection by the L88 mutator, CB120 antimutator, and wild type phage T4 DNA polymerases.

Authors:  F D Gillin; N G Nossal
Journal:  J Biol Chem       Date:  1976-09-10       Impact factor: 5.157

8.  Control of mutation frequency by bacteriophage T4 DNA polymerase. I. The CB120 antimutator DNA polymerase is defective in strand displacement.

Authors:  F D Gillin; N G Nossal
Journal:  J Biol Chem       Date:  1976-09-10       Impact factor: 5.157

9.  Mutator and antimutator phenotypes of suppressed amber mutants in genes 32, 41, 44, 45, and 62 in bacteriophage T4.

Authors:  S M Watanabe; M F Goodman
Journal:  J Virol       Date:  1978-01       Impact factor: 5.103

10.  Reversion of frameshift mutations stimulated by lesions in early function genes of bacteriophage T4.

Authors:  H Bernstein
Journal:  J Virol       Date:  1971-04       Impact factor: 5.103

  10 in total
  17 in total

Review 1.  DNA polymerase fidelity: from genetics toward a biochemical understanding.

Authors:  M F Goodman; K D Fygenson
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

Review 2.  Antimutator mutants in bacteriophage T4 and Escherichia coli.

Authors:  R M Schaaper
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

3.  The spectrum of acridine resistant mutants of bacteriophage T4 reveals cryptic effects of the tsL141 DNA polymerase allele on spontaneous mutagenesis.

Authors:  F J Wang; L S Ripley
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

4.  Deletions of bases in one strand of duplex DNA, in contrast to single-base mismatches, produce highly kinked molecules: possible relevance to the folding of single-stranded nucleic acids.

Authors:  C H Hsieh; J D Griffith
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

5.  Frameshift mutations produced by proflavin in bacteriophage T4: specificity within a hotspot.

Authors:  L S Ripley; A Clark
Journal:  Proc Natl Acad Sci U S A       Date:  1986-09       Impact factor: 11.205

6.  Demonstration of the production of frameshift and base-substitution mutations by quasipalindromic DNA sequences.

Authors:  J G de Boer; L S Ripley
Journal:  Proc Natl Acad Sci U S A       Date:  1984-09       Impact factor: 11.205

7.  An in vitro assay for frameshift mutations: hotspots for deletions of 1 bp by Klenow-fragment polymerase share a consensus DNA sequence.

Authors:  J G de Boer; L S Ripley
Journal:  Genetics       Date:  1988-02       Impact factor: 4.562

8.  The specificity of topoisomerase-mediated DNA cleavage defines acridine-induced frameshift specificity within a hotspot in bacteriophage T4.

Authors:  M Masurekar; K N Kreuzer; L S Ripley
Journal:  Genetics       Date:  1991-03       Impact factor: 4.562

9.  Characterization of mutational specificity within the lacI gene for a mutD5 mutator strain of Escherichia coli defective in 3'----5' exonuclease (proofreading) activity.

Authors:  R G Fowler; R M Schaaper; B W Glickman
Journal:  J Bacteriol       Date:  1986-07       Impact factor: 3.490

10.  DNA nick processing by exonuclease and polymerase activities of bacteriophage T4 DNA polymerase accounts for acridine-induced mutation specificities in T4.

Authors:  V L Kaiser; L S Ripley
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

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