Literature DB >> 6838830

Water catalysis of peptide hydrogen isotope exchange.

R B Gregory, L Crabo, A J Percy, A Rosenberg.   

Abstract

The temperature dependence of the hydrogen-tritium and deuterium-hydrogen exchange reactions in poly(DL-alanine) has been reexamined. The results indicate a significant contribution to the observed exchange rates from the water-catalyzed reaction at pD values near pDmin. The activation enthalpy for water-catalyzed deuterium-hydrogen exchange in poly(DL-alanine) is found to be 21 kcal mol-1. As a result, the contribution to the observed exchange rate from the water-catalyzed reaction increases with increasing temperature which in turn leads to broad, shallow pD minima and the appearance of apparent reaction orders with respect to [D+] and [OD-] that are substantially less than first order over an extended range of pD values. The importance of water catalysis in protein hydrogen exchange is demonstrated by a reanalysis of data for the exchange of single protons in bovine pancreatic trypsin inhibitor [Hilton, B.D., & Woodward, C. K. (1979) Biochemistry 18, 5834; Richarz, R., Sehr, P., Wagner, G., & Wüthrich, K. (1979) J. Mol. Biol. 130, 19]. The pD dependence of these protons can be explained in terms of an increased contribution from water catalysis.

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Year:  1983        PMID: 6838830     DOI: 10.1021/bi00273a031

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

Review 1.  Analytical Aspects of Hydrogen Exchange Mass Spectrometry.

Authors:  John R Engen; Thomas E Wales
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2015-05-29       Impact factor: 10.745

2.  Quantifying exchange rates in chemical exchange saturation transfer agents using the saturation time and saturation power dependencies of the magnetization transfer effect on the magnetic resonance imaging signal (QUEST and QUESP): Ph calibration for poly-L-lysine and a starburst dendrimer.

Authors:  Michael T McMahon; Assaf A Gilad; Jinyuan Zhou; Phillip Z Sun; Jeff W M Bulte; Peter C M van Zijl
Journal:  Magn Reson Med       Date:  2006-04       Impact factor: 4.668

3.  Measuring extracellular pH in a lung fibrosis model with acidoCEST MRI.

Authors:  Kyle M Jones; Edward A Randtke; Christine M Howison; Julio Cárdenas-Rodríguez; Patricia J Sime; Matthew R Kottmann; Mark D Pagel
Journal:  Mol Imaging Biol       Date:  2015-04       Impact factor: 3.488

4.  Using the water signal to detect invisible exchanging protons in the catalytic triad of a serine protease.

Authors:  Carolyn B Lauzon; Peter van Zijl; James T Stivers
Journal:  J Biomol NMR       Date:  2011-07-22       Impact factor: 2.835

5.  Quantification of protein backbone hydrogen-deuterium exchange rates by solid state NMR spectroscopy.

Authors:  Juan-Miguel Lopez del Amo; Uwe Fink; Bernd Reif
Journal:  J Biomol NMR       Date:  2010-10-20       Impact factor: 2.835

6.  Rapid and quantitative chemical exchange saturation transfer (CEST) imaging with magnetic resonance fingerprinting (MRF).

Authors:  Ouri Cohen; Shuning Huang; Michael T McMahon; Matthew S Rosen; Christian T Farrar
Journal:  Magn Reson Med       Date:  2018-05-13       Impact factor: 4.668

7.  Primary structure effects on peptide group hydrogen exchange.

Authors:  Y Bai; J S Milne; L Mayne; S W Englander
Journal:  Proteins       Date:  1993-09

8.  On the pH dependence of amide proton exchange rates in proteins.

Authors:  M A Eriksson; T Härd; L Nilsson
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

9.  Amide proton exchange rates of oxidized and reduced Saccharomyces cerevisiae iso-1-cytochrome c.

Authors:  J L Marmorino; D S Auld; S F Betz; D F Doyle; G B Young; G J Pielak
Journal:  Protein Sci       Date:  1993-11       Impact factor: 6.725

10.  Quantitative imaging of apoptosis following oncolytic virotherapy by magnetic resonance fingerprinting aided by deep learning.

Authors:  Or Perlman; Hirotaka Ito; Kai Herz; Naoyuki Shono; Hiroshi Nakashima; Moritz Zaiss; E Antonio Chiocca; Ouri Cohen; Matthew S Rosen; Christian T Farrar
Journal:  Nat Biomed Eng       Date:  2021-11-11       Impact factor: 29.234

  10 in total

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