Literature DB >> 6828383

Repetitive satellite-like sequences are present within or upstream from 3 avian protein-coding genes.

L Maroteaux, R Heilig, D Dupret, J L Mandel.   

Abstract

Peculiar DNA sequences made up by the tandem repetition of a 5 bp unit have been identified within or upstream from three avian protein-coding genes. One sequence is located within an intron of the chicken "ovalbumin-X" gene with 5'-TCTCC-3' as basic repeat unit (36 repeats). Another sequence made of 27 repeats of a 5'-GGAAG-3' basic unit is found 2500 base pairs upstream from the promoter of the chicken ovotransferrin (conalbumin) gene. A related but different sequence is present in the corresponding region of the ovotransferrin gene in the pheasant, with 5'-GGAAA-3' as the basic unit (55 repeats). These three satellite-like elements are thus characterized by a total assymetry in base distribution, with purines restricted to one strand, and pyrimidines to the other. Two of the basic repeat units can be derived from the third one (GGAAA) by a single base pair change. These related sequences are found repeated in three avian genomes, at degrees which vary both with the sequence type and the genome type. Evolution of tandemly repeated sequences (including satellites) is in general studied by analysing randomly picked elements. The presence of conserved protein-coding regions neighbouring satellite-like sequences allow to follow their evolution at a single locus, as exemplified by the striking comparison of the pheasant and chicken sequences upstream from the ovotransferrin gene.

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Year:  1983        PMID: 6828383      PMCID: PMC325792          DOI: 10.1093/nar/11.5.1227

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

1.  Slow evolutionary loss of the potential for interspecific hybridization in birds: a manifestation of slow regulatory evolution.

Authors:  E M Prager; A C Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  1975-01       Impact factor: 11.205

2.  Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.

Authors:  G M Wahl; M Stern; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

3.  Regulation of gene expression: possible role of repetitive sequences.

Authors:  E H Davidson; R J Britten
Journal:  Science       Date:  1979-06-08       Impact factor: 47.728

4.  Method for detection of specific RNAs in agarose gels by transfer to diazobenzyloxymethyl-paper and hybridization with DNA probes.

Authors:  J C Alwine; D J Kemp; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

5.  Organization and complete sequence of identical embryonic and plasmacytoma kappa V-region genes.

Authors:  Y Nishioka; P Leder
Journal:  J Biol Chem       Date:  1980-04-25       Impact factor: 5.157

6.  The ovalbumin gene-sequence of putative control regions.

Authors:  C Benoist; K O'Hare; R Breathnach; P Chambon
Journal:  Nucleic Acids Res       Date:  1980-01-11       Impact factor: 16.971

7.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  The DNA sequence of sea urchin (S. purpuratus) H2A, H2B and H3 histone coding and spacer regions.

Authors:  I Sures; J Lowry; L H Kedes
Journal:  Cell       Date:  1978-11       Impact factor: 41.582

9.  Satellite DNA is transcribed on lampbrush chromosomes.

Authors:  J M Varley; H C Macgregor; H P Erba
Journal:  Nature       Date:  1980-02-14       Impact factor: 49.962

10.  THE DNA components of the chicken genome.

Authors:  J Cortadas; B Olofsson; M Meunier-Rotival; G Macaya; G Bernardi
Journal:  Eur J Biochem       Date:  1979-08-15
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  15 in total

1.  Isolation of the chicken middle-molecular weight neurofilament (NF-M) gene and characterization of its promoter.

Authors:  D Zopf; B Dineva; H Betz; E D Gundelfinger
Journal:  Nucleic Acids Res       Date:  1990-02-11       Impact factor: 16.971

2.  Repeat arrays in cellular DNA related to the Epstein-Barr virus IR3 repeat.

Authors:  M Heller; E Flemington; E Kieff; P Deininger
Journal:  Mol Cell Biol       Date:  1985-03       Impact factor: 4.272

3.  Comparison of human and chimpanzee zeta 1 globin genes.

Authors:  C Willard; E Wong; J F Hess; C K Shen; B Chapman; A C Wilson; C W Schmid
Journal:  J Mol Evol       Date:  1985       Impact factor: 2.395

4.  New high copy tandem repeat in the content of the chicken W chromosome.

Authors:  Aleksey S Komissarov; Svetlana A Galkina; Elena I Koshel; Maria M Kulak; Aleksander G Dyomin; Stephen J O'Brien; Elena R Gaginskaya; Alsu F Saifitdinova
Journal:  Chromosoma       Date:  2017-09-26       Impact factor: 4.316

5.  Most highly repeated dispersed DNA families in the mouse genome.

Authors:  K L Bennett; R E Hill; D F Pietras; M Woodworth-Gutai; C Kane-Haas; J M Houston; J K Heath; N D Hastie
Journal:  Mol Cell Biol       Date:  1984-08       Impact factor: 4.272

6.  A chicken repetitive DNA sequence that is highly sensitive to single-strand specific endonucleases.

Authors:  K Dybvig; C D Clark; G Aliperti; M J Schlesinger
Journal:  Nucleic Acids Res       Date:  1983-12-10       Impact factor: 16.971

7.  Non-Alu family interspersed repeats in human DNA and their transcriptional activity.

Authors:  L Sun; K E Paulson; C W Schmid; L Kadyk; L Leinwand
Journal:  Nucleic Acids Res       Date:  1984-03-26       Impact factor: 16.971

8.  Human homologs of TU transposon sequences: polypurine/polypyrimidine sequence elements that can alter DNA conformation in vitro and in vivo.

Authors:  B Hoffman-Liebermann; D Liebermann; A Troutt; L H Kedes; S N Cohen
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

9.  Species-specific patterns of DNA bending and sequence.

Authors:  J D VanWye; E C Bronson; J N Anderson
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971

10.  Rat prostatic binding protein: the complete sequence of the C2 gene and its flanking regions.

Authors:  B Delaey; L Dirckx; J L Decourt; F Claessens; B Peeters; W Rombauts
Journal:  Nucleic Acids Res       Date:  1987-02-25       Impact factor: 16.971

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