Literature DB >> 6825690

Organization of nucleotide sequences in the chicken genome.

B Olofsson, G Bernardi.   

Abstract

The four major components of chicken DNA were prepared by density gradient centrifugation and characterized in several basic properties: relative amounts, dG + dC content, buoyant densities, compositional heterogeneity, and reassociation kinetics. While the relative amounts and the compositions of the major components of chicken DNA were similar to those found in mammalian genomes, their compositional heterogeneities were found to be narrower. The relative amounts of interspersed repeated and unique sequences were strikingly different in different components and also different from those found in the corresponding major components of mouse and human DNAs. If one takes into consideration that major DNA components (a) account for practically all of main-band DNA and (b) derive by preparative breakage from very long DNA segments of fairly homogeneous composition, the isochores, our findings indicate that the distribution of interspersed repeats is different in different chromosomal regions and is species-specific.

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Year:  1983        PMID: 6825690     DOI: 10.1111/j.1432-1033.1983.tb07142.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  14 in total

1.  Compositional mapping of chicken chromosomes and identification of the gene-richest regions.

Authors:  L Andreozzi; C Federico; S Motta; S Saccone; A L Sazanova; A A Sazanov; A F Smirnov; S A Galkina; N A Lukina; A V Rodionov; N Carels; G Bernardi
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

2.  Compositional gene landscapes in vertebrates.

Authors:  Stéphane Cruveiller; Kamel Jabbari; Oliver Clay; Giorgio Bernardi
Journal:  Genome Res       Date:  2004-05       Impact factor: 9.043

3.  Avian genomes: different karyotypes but a similar distribution of the GC-richest chromosome regions at interphase.

Authors:  Concetta Federico; Catia Daniela Cantarella; Cinzia Scavo; Salvatore Saccone; Bertrand Bed'Hom; Giorgio Bernardi
Journal:  Chromosome Res       Date:  2005-12-08       Impact factor: 5.239

4.  Gene-rich and gene-poor chromosomal regions have different locations in the interphase nuclei of cold-blooded vertebrates.

Authors:  Concetta Federico; Cinzia Scavo; Catia Daniela Cantarella; Salvatore Motta; Salvatore Saccone; Giorgio Bernardi
Journal:  Chromosoma       Date:  2006-01-11       Impact factor: 4.316

5.  The major compositional transitions in the vertebrate genome.

Authors:  G Bernardi; S Hughes; D Mouchiroud
Journal:  J Mol Evol       Date:  1997       Impact factor: 2.395

6.  Chromosome banding in amphibia. XI. Constitutive heterochromatin, nucleolus organizers, 18S + 28S and 5S ribosomal RNA genes in Ascaphidae, Pipidae, Discoglossidae and Pelobatidae.

Authors:  M Schmid; L Vitelli; R Batistoni
Journal:  Chromosoma       Date:  1987       Impact factor: 4.316

7.  Compositional compartmentalization and gene composition in the genome of vertebrates.

Authors:  D Mouchiroud; G Fichant; G Bernardi
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

8.  Compositional patterns in the nuclear genome of cold-blooded vertebrates.

Authors:  G Bernardi; G Bernardi
Journal:  J Mol Evol       Date:  1990-10       Impact factor: 2.395

9.  The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.

Authors:  P Soriano; M Meunier-Rotival; G Bernardi
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

10.  Genetic and physical mapping of the natural resistance-associated macrophage protein 1 (NRAMP1) in chicken.

Authors:  J Hu; N Bumstead; D Burke; F A Ponce de León; E Skamene; P Gros; D Malo
Journal:  Mamm Genome       Date:  1995-11       Impact factor: 2.957

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