Literature DB >> 6795622

An electron microscopic method for localization of ribosomal proteins during transcription of ribosomal DNA: a method for studying protein assembly.

W Y Chooi, K R Leiby.   

Abstract

We describe a method for the localization of ribosomal proteins on electron microscopic spreads of active rRNA genes. The method consists of raising antibodies against Drosophila melanogaster proteins and allowing these antibodies to react with lysates of D. melanogaster egg chambers. The locations of the bound IgGs in the active transcripts are detected with goat anti-rabbit IgGs that have been labeled with electron-dense polymethacrylate spheres. By statistical analysis we can generate a confidence interval for the initial point of protein assembly for a particular protein. The first point of protein assembly for S14 is located near the 5' end of the pre-18S rRNA. In contrast, the first point of protein assembly for L4 is at 0.38 unit from the initiation point (a unit being the length of a ribosomal transcription unit). The binding patterns of S14 and L4 are consistent with the 5' proximal and the 5' distal orientations of the pre-18S and the pre-28S rRNAs. The method described here provides an approach to the elucidation of the assembly of eukaryotic ribosomal proteins in vivo.

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Year:  1981        PMID: 6795622      PMCID: PMC320262          DOI: 10.1073/pnas.78.8.4823

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

1.  Diffusion-in-gel methods for immunological analysis.

Authors:  O OUCHTERLONY
Journal:  Prog Allergy       Date:  1958

2.  X and Y chromosomal ribosomal DNA of Drosophila: comparison of spacers and insertions.

Authors:  P K Wellauer; I B Dawid; K D Tartof
Journal:  Cell       Date:  1978-06       Impact factor: 41.582

Review 3.  The structure and function of eukaryotic ribosomes.

Authors:  I G Wool
Journal:  Annu Rev Biochem       Date:  1979       Impact factor: 23.643

4.  Analysis of chromatin-associated fiber arrays.

Authors:  C D Laird; L E Wilkinson; V E Foe; W Y Chooi
Journal:  Chromosoma       Date:  1976-10-28       Impact factor: 4.316

5.  DNA and polyribosome-like structures in lysates of mitochondria of Drosophila melanogaster.

Authors:  W Y Choci; C D Laird
Journal:  J Mol Biol       Date:  1976-02-05       Impact factor: 5.469

6.  Sequence arrangement of the rDNA of Drosophila melanogaster.

Authors:  M Pellegrini; J Manning; N Davidson
Journal:  Cell       Date:  1977-02       Impact factor: 41.582

7.  A new method of in situ hybridization.

Authors:  J E Manning; N D Hershey; T R Broker; M Pellegrini; H K Mitchell; N Davidson
Journal:  Chromosoma       Date:  1975-11-24       Impact factor: 4.316

8.  The occurrence of long transcription units among the X and Y ribosomal genes of Drosophila melanogaster: transcription of insertion sequences.

Authors:  W Y Chooi
Journal:  Chromosoma       Date:  1979-09-01       Impact factor: 4.316

9.  R loop mapping of the 18S and 28S sequences in the long and short repeating units of Drosophila melanogaster rDNA.

Authors:  R L White; D S Hogness
Journal:  Cell       Date:  1977-02       Impact factor: 41.582

10.  Two improved methods for preparing ferritin-protein conjugates for electron microscopy.

Authors:  Y Kishida; B R Olsen; R A Berg; D J Prockop
Journal:  J Cell Biol       Date:  1975-02       Impact factor: 10.539

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  23 in total

Review 1.  The moving parts of the nucleolus.

Authors:  M O J Olson; Miroslav Dundr
Journal:  Histochem Cell Biol       Date:  2005-03-02       Impact factor: 4.304

2.  Association of nonribosomal nucleolar proteins in ribonucleoprotein complexes during interphase and mitosis.

Authors:  S Piñol-Roma
Journal:  Mol Biol Cell       Date:  1999-01       Impact factor: 4.138

3.  Ultrastructural in situ hybridization to nascent transcripts of highly transcribed rRNA genes in chromatin spreads.

Authors:  M M O'Reilly; S L French; M L Sikes; O L Miller
Journal:  Chromosoma       Date:  1994-04       Impact factor: 4.316

Review 4.  Progress in visualization of eukaryotic gene transcription.

Authors:  M F Trendelenburg
Journal:  Hum Genet       Date:  1983       Impact factor: 4.132

5.  Decrease in ribosomal proteins 1, 2/3, L4, and L7 in Drosophila melanogaster in the absence of X rDNA.

Authors:  W Y Chooi; S M James; D K Burns
Journal:  Mol Gen Genet       Date:  1982

6.  Nucleolin provides a link between RNA polymerase I transcription and pre-ribosome assembly.

Authors:  Benoit Roger; André Moisand; François Amalric; Philippe Bouvet
Journal:  Chromosoma       Date:  2003-02-11       Impact factor: 4.316

7.  gar2 is a nucleolar protein from Schizosaccharomyces pombe required for 18S rRNA and 40S ribosomal subunit accumulation.

Authors:  M P Gulli; J P Girard; D Zabetakis; B Lapeyre; T Melese; M Caizergues-Ferrer
Journal:  Nucleic Acids Res       Date:  1995-06-11       Impact factor: 16.971

8.  Structural homology between Drosophila melanogaster and Escherichia coli acidic ribosomal proteins.

Authors:  W Y Chooi; L M Sabatini; M Macklin
Journal:  Biochem Genet       Date:  1984-08       Impact factor: 1.890

9.  Isolation and characterization of cloned DNA sequences containing ribosomal protein genes of Drosophila melanogaster.

Authors:  D K Burns; B C Stark; M D Macklin; W Y Chooi
Journal:  Mol Cell Biol       Date:  1984-12       Impact factor: 4.272

10.  Immunological evidence for structural homology between Drosophila melanogaster (S14), rabbit liver (S12), Saccharomyces cerevisiae (S25), Bacillus subtilis (S6), and Escherichia coli (S6) ribosomal proteins.

Authors:  W Y Chooi; E Otaka
Journal:  Mol Cell Biol       Date:  1984-11       Impact factor: 4.272

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