Literature DB >> 6755466

Specific interactions of Saccharomyces cerevisiae proteins with a promoter region of eukaryotic tRNA genes.

R Klemenz, D J Stillman, E P Geiduschek.   

Abstract

The specific binding of one or several Saccharomyces cerevisiae proteins to a segment of genes that code for different yeast tRNAs has been demonstrated with the use of the DNase I-protection "footprint" assay of Galas and Schmitz. The analyzed binding occurs near the 3' ends of the genes and is centered on an 11-base-pair DNA sequence that has been well conserved among eukaryotic tRNA genes. Others have shown the involvement of this sequence in initiating the transcription of tRNA genes by RNA polymerase III. The adenovirus gene that codes for VAI RNA also contains this conserved sequence element, and we detect binding of yeast protein(s) to this gene. Competition experiments show that a common set of proteins binds to different tRNA genes. The DNA-protein complex is quite stable at 20 degrees C and low ionic strength.

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Year:  1982        PMID： 6755466      PMCID： PMC347085          DOI： 10.1073/pnas.79.20.6191

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  35 in total

1.  DNAse footprinting: a simple method for the detection of protein-DNA binding specificity.

Authors:  D J Galas; A Schmitz
Journal:  Nucleic Acids Res       Date:  1978-09       Impact factor: 16.971

2.  Isolation of yeast tRNALeu genes. DNA sequence of a cloned tRNALeu3 gene.

Authors:  A Venegas; M Quiroga; J Zaldivar; W J Rutter; P Valenzuela
Journal:  J Biol Chem       Date:  1979-12-25       Impact factor: 5.157

3.  The interaction of RNA polymerase and lac repressor with the lac control region.

Authors:  A Schmitz; D J Galas
Journal:  Nucleic Acids Res       Date:  1979-01       Impact factor: 16.971

4.  Transformation in yeast: development of a hybrid cloning vector and isolation of the CAN1 gene.

Authors:  J R Broach; J N Strathern; J B Hicks
Journal:  Gene       Date:  1979-12       Impact factor: 3.688

5.  The use of thin acrylamide gels for DNA sequencing.

Authors:  F Sanger; A R Coulson
Journal:  FEBS Lett       Date:  1978-03-01       Impact factor: 4.124

6.  A control region in the center of the 5S RNA gene directs specific initiation of transcription: I. The 5' border of the region.

Authors:  S Sakonju; D F Bogenhagen; D D Brown
Journal:  Cell       Date:  1980-01       Impact factor: 41.582

7.  A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region.

Authors:  D F Bogenhagen; S Sakonju; D D Brown
Journal:  Cell       Date:  1980-01       Impact factor: 41.582

8.  Delimitation of a promoter for RNA polymerase III by means of a functional test.

Authors:  J L Telford; A Kressmann; R A Koski; R Grosschedl; F Müller; S G Clarkson; M L Birnstiel
Journal:  Proc Natl Acad Sci U S A       Date:  1979-06       Impact factor: 11.205

9.  Proteinase mutants of Saccharomyces cerevisiae.

Authors:  E W Jones
Journal:  Genetics       Date:  1977-01       Impact factor: 4.562

10.  Transcription of a cloned Bombyx mori tRNA2Ala gene: nucleotide sequence of the tRNA precursor and its processing in vitro.

Authors:  R L Garber; L P Gage
Journal:  Cell       Date:  1979-11       Impact factor: 41.582
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  34 in total

Review 1.  Integration sites for genetic elements in prokaryotic tRNA and tmRNA genes: sublocation preference of integrase subfamilies.

Authors:  Kelly P Williams
Journal:  Nucleic Acids Res       Date:  2002-02-15       Impact factor: 16.971

2.  Gene size differentially affects the binding of yeast transcription factor tau to two intragenic regions.

Authors:  R E Baker; S Camier; A Sentenac; B D Hall
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

3.  Displacement of Xenopus transcription factor IIIA from a 5S rRNA gene by a transcribing RNA polymerase.

Authors:  F E Campbell; D R Setzer
Journal:  Mol Cell Biol       Date:  1991-08       Impact factor: 4.272

4.  Transcriptional activity and factor binding are stimulated by separate and distinct sequences in the 5' flanking region of a mouse tRNAAsp gene.

Authors:  R J Rooney; J D Harding
Journal:  Nucleic Acids Res       Date:  1988-03-25       Impact factor: 16.971

5.  Competitive and cooperative functioning of the anterior and posterior promoter elements of an Alu family repeat.

Authors:  C Perez-Stable; C K Shen
Journal:  Mol Cell Biol       Date:  1986-06       Impact factor: 4.272

6.  A 23-kilodalton protein, distinct from BvgA, expressed by virulent Bordetella pertussis binds to the promoter region of vir-regulated toxin genes.

Authors:  Y J Huh; A A Weiss
Journal:  Infect Immun       Date:  1991-07       Impact factor: 3.441

7.  Transcription of eucaryotic tRNA1met and 5SRNA genes by RNA polymerase III is blocked by base mismatches in the intragenic control regions.

Authors:  M A Sullivan; W R Folk
Journal:  Nucleic Acids Res       Date:  1987-03-11       Impact factor: 16.971

8.  Mutational analysis of the coordinate expression of the yeast tRNAArg-tRNAAsp gene tandem.

Authors:  V M Reyes; A Newman; J Abelson
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

9.  Effects of altered 5'-flanking sequences on the in vivo expression of a Saccharomyces cerevisiae tRNATyr gene.

Authors:  K J Shaw; M V Olson
Journal:  Mol Cell Biol       Date:  1984-04       Impact factor: 4.272

10.  Identification of a 150-kilodalton polypeptide that copurifies with yeast TFIIIC and binds specifically to tRNA genes.

Authors:  D L Johnson; S L Wilson
Journal:  Mol Cell Biol       Date:  1989-05       Impact factor: 4.272
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