Literature DB >> 6549131

Computer aided evaluation of two-dimensional NMR spectra of proteins.

K P Neidig, H Bodenmueller, H R Kalbitzer.   

Abstract

A computer program for the automatic evaluation of two-dimensional NMR spectra of peptides and proteins has been developed. The used strategy is described, the advantages and limits of this approach are discussed. The program was successfully tested on a COSY-spectrum of the neuropeptide Glp-Pro-Pro-Gly-Gly-Ser-Lys-Val-Ile-Leu-Phe from hydra, resulting in a drastic reduction of the time needed for the evaluation of two-dimensional NMR data.

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Year:  1984        PMID： 6549131     DOI： 10.1016/0006-291x(84)91403-7

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN： 0006-291X            Impact factor:   3.575


  8 in total

1.  Efficient analysis of protein 2D NMR spectra using the software package EASY.

Authors:  C Eccles; P Güntert; M Billeter; K Wüthrich
Journal:  J Biomol NMR       Date:  1991-07       Impact factor: 2.835

2.  Chemical shift optimization in multidimensional NMR spectra by AUREMOL-SHIFTOPT.

Authors:  Kumaran Baskaran; Renate Kirchhöfer; Fritz Huber; Jochen Trenner; Konrad Brunner; Wolfram Gronwald; Klaus-Peter Neidig; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2009-02-21       Impact factor: 2.835

3.  A computer-based protocol for semiautomated assignments and 3D structure determination of proteins.

Authors:  R P Meadows; E T Olejniczak; S W Fesik
Journal:  J Biomol NMR       Date:  1994-01       Impact factor: 2.835

4.  A general Bayesian method for an automated signal class recognition in 2D NMR spectra combined with a multivariate discriminant analysis.

Authors:  C Antz; K P Neidig; H R Kalbitzer
Journal:  J Biomol NMR       Date:  1995-04       Impact factor: 2.835

5.  AURELIA, a program for computer-aided analysis of multidimensional NMR spectra.

Authors:  K P Neidig; M Geyer; A Görler; C Antz; R Saffrich; W Beneicke; H R Kalbitzer
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

Authors:  C Bartels; T H Xia; M Billeter; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

7.  Computer-assisted assignment of 2D 1H NMR spectra of proteins: basic algorithms and application to phoratoxin B.

Authors:  G J Kleywegt; R Boelens; M Cox; M Llinás; R Kaptein
Journal:  J Biomol NMR       Date:  1991-05       Impact factor: 2.835

8.  Fundamental and practical aspects of machine learning for the peak picking of biomolecular NMR spectra.

Authors:  Da-Wei Li; Alexandar L Hansen; Lei Bruschweiler-Li; Chunhua Yuan; Rafael Brüschweiler
Journal:  J Biomol NMR       Date:  2022-04-07       Impact factor: 2.582
  8 in total

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