Literature DB >> 6546441

'ZSTATS'--a statistical analysis for potential Z-DNA sequences.

J K Vass, R H Wilson.   

Abstract

We have developed a FORTRAN programme for scanning DNA sequences for potential Z-DNA forming regions using the One-Sample Runs Test. The programme also detects other non-random arrangements of purines and pyrimidines on the same strand and will detect purine- or pyrimidine-rich strands and G:C- or A:T-rich regions. A series of test statistics are produced as a graphical output and these have been used to search a number of beta- type globin DNA sequences for potential Z-DNA regions whose biological significance is briefly discussed.

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Year:  1984        PMID: 6546441      PMCID: PMC321097          DOI: 10.1093/nar/12.1part2.825

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  9 in total

1.  The sequence of the chromosomal mouse beta-globin major gene: homologies in capping, splicing and poly(A) sites.

Authors:  D A Konkel; S M Tilghman; P Leder
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

2.  A member of a new repeated sequence family which is conserved throughout eucaryotic evolution is found between the human delta and beta globin genes.

Authors:  R Miesfeld; M Krystal; N Arnheim
Journal:  Nucleic Acids Res       Date:  1981-11-25       Impact factor: 16.971

3.  The primary structure of the human epsilon-globin gene.

Authors:  F E Baralle; C C Shoulders; N J Proudfoot
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

4.  The nucleotide sequence of the human beta-globin gene.

Authors:  R M Lawn; A Efstratiadis; C O'Connell; T Maniatis
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

5.  A history of the human fetal globin gene duplication.

Authors:  S H Shen; J L Slightom; O Smithies
Journal:  Cell       Date:  1981-10       Impact factor: 41.582

6.  Automation of the computer handling of gel reading data produced by the shotgun method of DNA sequencing.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1982-08-11       Impact factor: 16.971

7.  Wrinkled DNA.

Authors:  S Arnott; R Chandrasekaran; L C Puigjaner; J K Walker; I H Hall; D L Birdsall; R L Ratliff
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

8.  The DNA sequence of the 5' flanking region of the human beta-globin gene: evolutionary conservation and polymorphic differences.

Authors:  N Moschonas; E de Boer; R A Flavell
Journal:  Nucleic Acids Res       Date:  1982-03-25       Impact factor: 16.971

9.  Left-handed DNA helices.

Authors:  S Arnott; R Chandrasekaran; D L Birdsall; A G Leslie; R L Ratliff
Journal:  Nature       Date:  1980-02-21       Impact factor: 49.962

  9 in total

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