Literature DB >> 6514578

Generation and functional analyses for base-substitution mutants of the adenovirus 2 major late promoter.

Y T Yu, J L Manley.   

Abstract

The function of guanosine residues surrounding the TATA box of the adenovirus 2 major late promoter (MLP) in promoting efficient transcription initiation and in selecting a specific transcription start site in vitro has been examined. Multiple and single base substitutions (G----A) were generated in this region (from -63 to +25 relative to the cap site, +1) of the MLP. The promoter activities of the wild type and 21 mutants were assayed in an in vitro transcription system using whole cell extract (WCE) prepared from HeLa cells. The results suggest that the strings of G residues immediately adjacent to the TATA box are not required for full promoter activity in vitro. These G residues also appear not to be involved in the selection of a specific transcription start site by RNA polymerase II in vitro, since the identical cap site was used by wild-type and mutated MLP's. However, two G residues (-55 and -57) were identified as part of an upstream promoter element: a G----A transition at either -55 or -57 resulted in a 2.6 fold reduction in promoter activity. However, neither single nor double G----A transitions at -62 and -63 had an effect on promoter activity.

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Year:  1984        PMID: 6514578      PMCID: PMC320463          DOI: 10.1093/nar/12.24.9309

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  33 in total

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Authors:  T Maniatis; A Jeffrey; H van deSande
Journal:  Biochemistry       Date:  1975-08-26       Impact factor: 3.162

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Authors:  C Benoist; P Chambon
Journal:  Nature       Date:  1981-03-26       Impact factor: 49.962

3.  Promoter sequences of eukaryotic protein-coding genes.

Authors:  J Corden; B Wasylyk; A Buchwalder; P Sassone-Corsi; C Kedinger; P Chambon
Journal:  Science       Date:  1980-09-19       Impact factor: 47.728

4.  In vitro transcription from the adenovirus 2 major late promoter utilizing templates truncated at promoter-proximal sites.

Authors:  R Jove; J L Manley
Journal:  J Biol Chem       Date:  1984-07-10       Impact factor: 5.157

5.  Identification of regulatory sequences in the prelude sequences of an H2A histone gene by the study of specific deletion mutants in vivo.

Authors:  R Grosschedl; M L Birnstiel
Journal:  Proc Natl Acad Sci U S A       Date:  1980-03       Impact factor: 11.205

6.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

7.  Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange.

Authors:  G K McMaster; G G Carmichael
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

8.  DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.

Authors:  J L Manley; A Fire; A Cano; P A Sharp; M L Gefter
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

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Authors:  E B Ziff; R M Evans
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

10.  Specific in vitro initiation of transcription on conalbumin and ovalbumin genes and comparison with adenovirus-2 early and late genes.

Authors:  B Wasylyk; C Kédinger; J Corden; O Brison; P Chambon
Journal:  Nature       Date:  1980-06-05       Impact factor: 49.962

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  29 in total

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Authors:  R Evans; J A Fairley; S G Roberts
Journal:  Genes Dev       Date:  2001-11-15       Impact factor: 11.361

2.  Core promoter elements and TAFs contribute to the diversity of transcriptional activation in vertebrates.

Authors:  Zheng Chen; James L Manley
Journal:  Mol Cell Biol       Date:  2003-10       Impact factor: 4.272

3.  Identification of a novel downstream binding protein implicated in late-phase-specific activation of the adenovirus major late promotor.

Authors:  G Mondesert; C Tribouley; C Kedinger
Journal:  Nucleic Acids Res       Date:  1992-08-11       Impact factor: 16.971

4.  Recombinant 43-kDa USF binds to DNA and activates transcription in a manner indistinguishable from that of natural 43/44-kDa USF.

Authors:  P Pognonec; R G Roeder
Journal:  Mol Cell Biol       Date:  1991-10       Impact factor: 4.272

5.  High-level transcription from the adenovirus major late promoter requires downstream binding sites for late-phase-specific factors.

Authors:  K Leong; W Lee; A J Berk
Journal:  J Virol       Date:  1990-01       Impact factor: 5.103

6.  Analysis of the chicken TBP-like protein(tlp) gene: evidence for a striking conservation of vertebrate TLPs and for a close relationship between vertebrate tbp and tlp genes.

Authors:  M Shimada; T Ohbayashi; M Ishida; T Nakadai; Y Makino; T Aoki; T Kawata; T Suzuki; Y Matsuda; T Tamura
Journal:  Nucleic Acids Res       Date:  1999-08-01       Impact factor: 16.971

7.  Downstream sequences affect transcription initiation from the adenovirus major late promoter.

Authors:  S L Mansour; T Grodzicker; R Tjian
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

8.  DNA affinity labeling of adenovirus type 2 upstream promoter sequence-binding factors identifies two distinct proteins.

Authors:  B Safer; R B Cohen; S Garfinkel; J A Thompson
Journal:  Mol Cell Biol       Date:  1988-01       Impact factor: 4.272

9.  A single polypeptide possesses the binding and transcription activities of the adenovirus major late transcription factor.

Authors:  L A Chodosh; R W Carthew; P A Sharp
Journal:  Mol Cell Biol       Date:  1986-12       Impact factor: 4.272

10.  TIPT2 and geminin interact with basal transcription factors to synergize in transcriptional regulation.

Authors:  Mara E Pitulescu; Martin Teichmann; Lingfei Luo; Michael Kessel
Journal:  BMC Biochem       Date:  2009-06-10       Impact factor: 4.059

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