Literature DB >> 6508781

Sequential assignment of the 1H and 31P resonances of the double stranded deoxynucleotide d (ATGCAT)2 by 2D-NMR correlation spectroscopy.

D Marion, G Lancelot.   

Abstract

31p-1H and 1H-1H chemical shift correlation spectroscopy are jointly used for providing a complete assignment of sugar proton (except H5' and H5") and phosphorus resonances in the double stranded oligonucleotide d (ATGCAT)2. In contrast to previous methods the specific assignment of overcrowded H5' H5" proton resonances is not required. Using the H3'-P coupling and also the long range H4'-P coupling, this quite general method can be easily implemented on intermediate field spectrometer. The present results pave the way to the 1H and 31P resonance assignment of longer double-stranded oligonucleotides.

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Year:  1984        PMID: 6508781     DOI: 10.1016/0006-291x(84)91025-8

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  9 in total

1.  N.m.r. determination of the solution conformation and dynamics of the A.G mismatch in the d(CGCAAATTGGCG)2 dodecamer.

Authors:  A N Lane; T C Jenkins; D J Brown; T Brown
Journal:  Biochem J       Date:  1991-10-01       Impact factor: 3.857

2.  The solution conformations of a mutant trp operator determined by n.m.r. spectroscopy.

Authors:  A N Lane
Journal:  Biochem J       Date:  1991-01-15       Impact factor: 3.857

3.  Resonance assignments of non-exchangeable protons in B type DNA oligomers, an overview.

Authors:  F J van de Ven; C W Hilbers
Journal:  Nucleic Acids Res       Date:  1988-07-11       Impact factor: 16.971

4.  Study of structure, base-pair opening kinetics and proton exchange mechanism of the d-(AATTGCAATT) self-complementary oligodeoxynucleotide in solution.

Authors:  M Kochoyan; G Lancelot; J L Leroy
Journal:  Nucleic Acids Res       Date:  1988-08-11       Impact factor: 16.971

5.  N.m.r. assignments and temperature-dependent conformational transitions of a mutant trp operator-promoter in solution.

Authors:  A N Lane
Journal:  Biochem J       Date:  1989-05-01       Impact factor: 3.857

6.  2D-NMR studies of the unnatural duplex alpha-d(TCTAAAC)-beta-d(AGATTTG).

Authors:  G Lancelot; J L Guesnet; V Roig; N T Thuong
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

7.  Alkyl phosphotriester modified oligodeoxyribonucleotides. VI. NMR and UV spectroscopic studies of ethyl phosphotriester (Et) modified Rp-Rp and Sp-Sp duplexes, (d[GGAA(Et)TTCC])2.

Authors:  M F Summers; C Powell; W Egan; R A Byrd; W D Wilson; G Zon
Journal:  Nucleic Acids Res       Date:  1986-09-25       Impact factor: 16.971

8.  The 31P-NMR spectrum of the dodecamer d(GACGATATCGTC).

Authors:  J Ott; F Eckstein; B A Connolly
Journal:  Nucleic Acids Res       Date:  1985-09-11       Impact factor: 16.971

9.  Two- and three-dimensional 31P-driven NMR procedures for complete assignment of backbone resonances in oligodeoxyribonucleotides.

Authors:  G W Kellogg; B I Schweitzer
Journal:  J Biomol NMR       Date:  1993-09       Impact factor: 2.835

  9 in total

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