Literature DB >> 6487632

The prediction of protein domains.

B Busetta, Y Barrans.   

Abstract

The ab initio prediction of the domain boundaries and types remains one of the most important problems which makes a possible description of protein tertiary structure from its amino-acid sequence elusive. The present paper describes new methods to predict both of them. The predictions of domain boundaries and types in proteins of known X-ray structures are reported in order to check the efficiency of these new algorithms.

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Year:  1984        PMID: 6487632     DOI: 10.1016/0167-4838(84)90214-0

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  7 in total

1.  Rapid protein domain assignment from amino acid sequence using predicted secondary structure.

Authors:  Russell L Marsden; Liam J McGuffin; David T Jones
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

2.  Characterization and prediction of linker sequences of multi-domain proteins by a neural network.

Authors:  Satoshi Miyazaki; Yutaka Kuroda; Shigeyuki Yokoyama
Journal:  J Struct Funct Genomics       Date:  2002

3.  Sequence-based prediction of protein domains.

Authors:  Jinfeng Liu; Burkhard Rost
Journal:  Nucleic Acids Res       Date:  2004-07-07       Impact factor: 16.971

4.  Prediction of protein domain boundaries from sequence alone.

Authors:  Oxana V Galzitskaya; Bogdan S Melnik
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

5.  Prediction of the location of structural domains in globular proteins.

Authors:  T Kikuchi; G Némethy; H A Scheraga
Journal:  J Protein Chem       Date:  1988-08

6.  A procedure for detecting structural domains in proteins.

Authors:  M B Swindells
Journal:  Protein Sci       Date:  1995-01       Impact factor: 6.725

7.  Discrimination of folding types of globular proteins based on average distance maps constructed from their sequences.

Authors:  T Kikuchi
Journal:  J Protein Chem       Date:  1993-10
  7 in total

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