Literature DB >> 6487576

Thermodynamic linkages in rabbit muscle pyruvate kinase: kinetic, equilibrium, and structural studies.

R W Oberfelder, L L Lee, J C Lee.   

Abstract

The mechanism of allosteric regulation of rabbit muscle pyruvate kinase (PK) was examined in the presence of the allosteric inhibitor phenylalanine (Phe). Steady-state kinetic, equilibrium binding, and structural studies were conducted to provide a broad data base to establish a reasonable model for the interactions. Phe was shown to induce apparent cooperativity in the steady-state kinetic measurements at pH 7.5 and 23 degrees C. The apparent Km for phosphoenolpyruvate was shown to increase with increasing Phe concentrations. These results imply that Phe reduces the affinity of PK for phosphoenolpyruvate. This conclusion was substantiated by equilibrium binding studies which yielded association constants of phosphoenolpyruvate as a function of Phe concentration. The binding constant of Phe was also determined at pH 7.0 and 23 degrees C. The effect of ligands on the hydrodynamic properties of PK was monitored by difference sedimentation velocity, sedimentation velocity, and equilibrium experiments. The results showed that PK remains tetrameric both in the presence and in the absence of Phe. However, Phe induces a small decrease in the sedimentation coefficient of the enzyme; hence, it suggests a loosening of the protein structure. The accessibility of the sulfhydryl residues of the enzyme also increases in the presence of Phe. Furthermore, the Phe-induced conformational change was approximately 90% complete when only 25% of the binding sites were saturated. This result suggested that the regulatory behavior of PK might satisfactorily be described by the two-state model of Monod-Wyman-Changeux [Monod, J., Wyman, J., & Changeux, J.-P. (1965) J. Mol. Biol. 12, 88-118].

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Year:  1984        PMID: 6487576     DOI: 10.1021/bi00312a004

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

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Authors:  Kailei Lin; Huayan Yang; Zhengya Gao; Feng Li; Shaoning Yu
Journal:  Eur Biophys J       Date:  2013-03-07       Impact factor: 1.733

2.  Using modern approaches to sedimentation velocity to detect conformational changes in proteins.

Authors:  Chad A Brautigam; Shih-Chia Tso; Ranjit K Deka; Wei Z Liu; Michael V Norgard
Journal:  Eur Biophys J       Date:  2020-08-05       Impact factor: 1.733

3.  Effects of heterogeneity and cooperativity on the forms of binding curves for multivalent ligands.

Authors:  S J Harris; C M Jackson; D J Winzor
Journal:  J Protein Chem       Date:  1995-08

4.  Identification of regions of rabbit muscle pyruvate kinase important for allosteric regulation by phenylalanine, detected by H/D exchange mass spectrometry.

Authors:  Charulata B Prasannan; Maria T Villar; Antonio Artigues; Aron W Fenton
Journal:  Biochemistry       Date:  2013-03-06       Impact factor: 3.162

5.  Exploring the limits of the usefulness of mutagenesis in studies of allosteric mechanisms.

Authors:  Qingling Tang; Aileen Y Alontaga; Todd Holyoak; Aron W Fenton
Journal:  Hum Mutat       Date:  2017-05-23       Impact factor: 4.878

6.  Functional energetic landscape in the allosteric regulation of muscle pyruvate kinase. 1. Calorimetric study.

Authors:  Petr Herman; J Ching Lee
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

7.  Functional energetic landscape in the allosteric regulation of muscle pyruvate kinase. 2. Fluorescence study.

Authors:  Petr Herman; J Ching Lee
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

Review 8.  Modulation of allostery of pyruvate kinase by shifting of an ensemble of microstates.

Authors:  J Ching Lee
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2008-07       Impact factor: 3.848

9.  Probing the catalytic allosteric mechanism of rabbit muscle pyruvate kinase by tryptophan fluorescence quenching.

Authors:  Feng Li; Ting Yu; Yuwei Zhao; Shaoning Yu
Journal:  Eur Biophys J       Date:  2012-07-12       Impact factor: 1.733

  9 in total

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