Literature DB >> 6440141

Essential site for growth rate-dependent regulation within the Escherichia coli gnd structural gene.

H V Baker, R E Wolf.   

Abstract

Expression of gnd of Escherichia coli, which encodes the hexose monophosphate shunt enzyme, 6-phosphogluconate dehydrogenase (6PGD; EC 1.1.1.44), is subject to growth rate-dependent regulation: the level of the enzyme is directly proportional to growth rate under a variety of growth conditions. Previous results obtained with strains carrying transcriptional fusions of gnd to the structural genes of the lactose operon suggested that the growth rate-dependent regulation of gnd expression is at the post-transcriptional level. To characterize the regulation further, we prepared with phage MudII a set of eight independent gnd-lac gene (protein) fusions. We showed through genetic analysis and DNA sequencing that each fusion joint was located within the 6PGD-coding sequence between the first and second base pair of a codon, the reading frame required for production of a hybrid 6PGD-beta-galactosidase. Strains harboring the gnd-lac fusion plasmids produced proteins whose mobility in a NaDodSO4/polyacrylamide gel agreed with the molecular weights predicted from the DNA sequence for the respective hybrid proteins. The level of beta-galactosidase was high and relatively growth rate-independent in the fusion whose fusion joint was at codon 48. The level of beta-galactosidase in the other seven fusion strains whose fusion joints were located further downstream in the 6PGD-coding sequence showed the same dependence on growth rate as 6PGD in a normal strain. beta-Galactosidase levels were not affected by the presence of a gnd+ gene in trans to any of the fusions. The results suggest that all sites necessary for growth rate-dependent regulation of 6PGD level lie in gnd upstream from codon 118 and that an essential site of negative control lies within the coding sequence, between codons 48 and 118.

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Year:  1984        PMID: 6440141      PMCID: PMC392213          DOI: 10.1073/pnas.81.24.7669

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Regulation of expression of the flagellin gene (hag) in Escherichia coli K-12: analysis of hag-lac gene fusions.

Authors:  Y Komeda; T Iino
Journal:  J Bacteriol       Date:  1979-09       Impact factor: 3.490

2.  Patterns of protein synthesis in E. coli: a catalog of the amount of 140 individual proteins at different growth rates.

Authors:  S Pedersen; P L Bloch; S Reeh; F C Neidhardt
Journal:  Cell       Date:  1978-05       Impact factor: 41.582

3.  A fast and simple method for sequencing DNA cloned in the single-stranded bacteriophage M13.

Authors:  P H Schreier; R Cortese
Journal:  J Mol Biol       Date:  1979-03-25       Impact factor: 5.469

4.  A role for mRNA secondary structure in the control of translation initiation.

Authors:  M N Hall; J Gabay; M Débarbouillé; M Schwartz
Journal:  Nature       Date:  1982-02-18       Impact factor: 49.962

Review 5.  Expression of ribosomal genes in bacteria.

Authors:  L Lindahl; J M Zengel
Journal:  Adv Genet       Date:  1982       Impact factor: 1.944

6.  Secondary structure of mRNA and efficiency of translation initiation.

Authors:  D Iserentant; W Fiers
Journal:  Gene       Date:  1980-04       Impact factor: 3.688

7.  Differential translation efficiency explains discoordinate expression of the galactose operon.

Authors:  C Queen; M Rosenberg
Journal:  Cell       Date:  1981-07       Impact factor: 41.582

8.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

9.  Systematic alteration of the nucleotide sequence preceding the translation initiation codon and the effects on bacterial expression of the cloned SV40 small-t antigen gene.

Authors:  D Gheysen; D Iserentant; C Derom; W Fiers
Journal:  Gene       Date:  1982-01       Impact factor: 3.688

10.  Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system.

Authors:  T Ikemura
Journal:  J Mol Biol       Date:  1981-09-25       Impact factor: 5.469

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  13 in total

1.  Growth-rate-dependent expression and cloning of gnd alleles from natural isolates of Escherichia coli.

Authors:  G J Barcak; R E Wolf
Journal:  J Bacteriol       Date:  1988-01       Impact factor: 3.490

2.  Molecular characterization of the Escherichia coli K-12 zwf gene encoding glucose 6-phosphate dehydrogenase.

Authors:  D L Rowley; R E Wolf
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

3.  Genetic and physical analyses of the growth rate-dependent regulation of Escherichia coli zwf expression.

Authors:  D L Rowley; A J Pease; R E Wolf
Journal:  J Bacteriol       Date:  1991-08       Impact factor: 3.490

4.  Inhibition of translation initiation on Escherichia coli gnd mRNA by formation of a long-range secondary structure involving the ribosome binding site and the internal complementary sequence.

Authors:  J T Chang; C B Green; R E Wolf
Journal:  J Bacteriol       Date:  1995-11       Impact factor: 3.490

Review 5.  Uses of lac fusions for the study of biological problems.

Authors:  T J Silhavy; J R Beckwith
Journal:  Microbiol Rev       Date:  1985-12

6.  A regulatory element within a gene of a ribosomal protein operon of Escherichia coli negatively controls expression by decreasing the translational efficiency.

Authors:  P M Wikström; G R Björk
Journal:  Mol Gen Genet       Date:  1989-11

7.  Growth-rate-dependent regulation of 6-phosphogluconate dehydrogenase level mediated by an anti-Shine-Dalgarno sequence located within the Escherichia coli gnd structural gene.

Authors:  P Carter-Muenchau; R E Wolf
Journal:  Proc Natl Acad Sci U S A       Date:  1989-02       Impact factor: 11.205

8.  Altered growth-rate-dependent regulation of 6-phosphogluconate dehydrogenase level in hisT mutants of Salmonella typhimurium and Escherichia coli.

Authors:  W R Jones; G J Barcak; R E Wolf
Journal:  J Bacteriol       Date:  1990-03       Impact factor: 3.490

9.  Determination of the growth rate-regulated steps in expression of the Escherichia coli K-12 gnd gene.

Authors:  A J Pease; R E Wolf
Journal:  J Bacteriol       Date:  1994-01       Impact factor: 3.490

10.  Effect of cell growth rate on expression of the anaerobic respiratory pathway operons frdABCD, dmsABC, and narGHJI of Escherichia coli.

Authors:  C P Tseng; A K Hansen; P Cotter; R P Gunsalus
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

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