Literature DB >> 6424648

19F-n.m.r. studies of 3',5'-difluoromethotrexate binding to Lactobacillus casei dihydrofolate reductase. Molecular motion and coenzyme-induced conformational changes.

G M Clore, A M Gronenborn, B Birdsall, J Feeney, G C Roberts.   

Abstract

19F-n.m.r. spectroscopy was used to study the binding of 3',5'-difluoromethotrexate to dihydrofolate reductase (tetrahydrofolate dehydrogenase) from Lactobacillus casei. The benzoyl ring of the bound difluoromethotrexate was found to 'flip' about its symmetry axis, and the rate (7.3 X 10(3) s-1 at 298 K) and activation parameters for this process were determined by lineshape analysis of the 19F-n.m.r. spectrum at a series of temperatures in the range 273-308 K. The contributions to the barrier for this process are discussed. Addition of NADP+ or NADPH to form the enzyme-difluoromethotrexate-coenzyme ternary complex led to an increase in the rate of benzoyl ring flipping by a factor of 2.6-2.8-fold, and to substantial changes in the 19F-n.m.r. chemical shifts. The possible nature of the coenzyme-induced conformational changes responsible for these effects is discussed.

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Year:  1984        PMID: 6424648      PMCID: PMC1153266          DOI: 10.1042/bj2170659

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  27 in total

1.  Dynamics of the aromatic amino acid residues in the globular conformation of the basic pancreatic trypsin inhibitor (BPTI). II. Semi-empirical energy calculations.

Authors:  R Hetzel; K Wüthrich; J Deisenhofer; R Huber
Journal:  Biophys Struct Mech       Date:  1976-08-23

2.  1H nuclear magnetic resonance studies of Lactobacillus casei dihydrofolate reductase: effects of substrate and inhibitor binding on the histidine residues.

Authors:  B Birdsall; D V Griffiths; G C Roberts; J Feeney; A Burgen
Journal:  Proc R Soc Lond B Biol Sci       Date:  1977-03-18

3.  1H nuclear magnetic resonance studies of the tyrosine residues of selectively deuterated Lactobacillus casei dihydrofolate reductase.

Authors:  J Feeney; G C Roberts; B Birdsall; D V Griffiths; R W King; P Scudder; A Burgen
Journal:  Proc R Soc Lond B Biol Sci       Date:  1977-03-18

4.  Sidechain torsional potentials and motion of amino acids in porteins: bovine pancreatic trypsin inhibitor.

Authors:  B R Gelin; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1975-06       Impact factor: 11.205

5.  Proton magnetic resonance studies of the tyrosine residues of hen lysozyme-assignment and detection of conformational mobility.

Authors:  I D Campbell; C M Dobson; R J Williams
Journal:  Proc R Soc Lond B Biol Sci       Date:  1975-06-17

6.  NMR investigations of the dynamics of the aromatic amino acid residues in the basic pancreatic trypsin inhibitor.

Authors:  K Wüthrich; G Wagner
Journal:  FEBS Lett       Date:  1975-02-01       Impact factor: 4.124

7.  Complete tyrosine assignments in the high field 1H nuclear magnetic resonance spectrum of the bovine pancreatic trypsin inhibitor.

Authors:  G H Snyder; R Rowan; S Karplus; B D Sykes
Journal:  Biochemistry       Date:  1975-08-26       Impact factor: 3.162

8.  Temperature dependent molecular motion of a tyrosine residue of ferrocytochrome C.

Authors:  I D Campbell; C M Dobson; G R Moore; S J Perkins; R J Williams
Journal:  FEBS Lett       Date:  1976-11       Impact factor: 4.124

9.  Preliminary clinical trials of dichloromethotrexate (NSC-29630) in hepatocellular carcinoma.

Authors:  C L Vogel; R H Adamson; V T DeVita; D G Johns; S K Kyalwazi
Journal:  Cancer Chemother Rep       Date:  1972-04

10.  Large-scale purification and characterization of dihydrofolate reductase from a methotrexate-resistant strain of Lactobacillus casei.

Authors:  J G Dann; G Ostler; R A Bjur; R W King; P Scudder; P C Turner; G C Roberts; A S Burgen
Journal:  Biochem J       Date:  1976-09-01       Impact factor: 3.857

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  5 in total

Review 1.  The study of conformational states of proteins by nuclear magnetic resonance.

Authors:  I D Campbell; C M Dobson; R J Williams
Journal:  Biochem J       Date:  1985-10-01       Impact factor: 3.857

2.  Structure and dynamics in solution of the complex of Lactobacillus casei dihydrofolate reductase with the new lipophilic antifolate drug trimetrexate.

Authors:  V I Polshakov; B Birdsall; T A Frenkiel; A R Gargaro; J Feeney
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

3.  19F Magic Angle Spinning NMR Spectroscopy and Density Functional Theory Calculations of Fluorosubstituted Tryptophans: Integrating Experiment and Theory for Accurate Determination of Chemical Shift Tensors.

Authors:  Manman Lu; Sucharita Sarkar; Mingzhang Wang; Jodi Kraus; Matthew Fritz; Caitlin M Quinn; Shi Bai; Sean T Holmes; Cecil Dybowski; Glenn P A Yap; Jochem Struppe; Ivan V Sergeyev; Werner Maas; Angela M Gronenborn; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2018-05-30       Impact factor: 2.991

4.  Dynamics of trimethoprim bound to dihydrofolate reductase.

Authors:  M S Searle; M J Forster; B Birdsall; G C Roberts; J Feeney; H T Cheung; I Kompis; A J Geddes
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

5.  3H-n.m.r. studies of multiple conformations and dynamic processes in complexes of folate and methotrexate with Lactobacillus casei dihydrofolate reductase.

Authors:  N Curtis; S Moore; B Birdsall; J Bloxsidge; C L Gibson; J R Jones; J Feeney
Journal:  Biochem J       Date:  1994-10-15       Impact factor: 3.857

  5 in total

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