Literature DB >> 6380573

Catalytic mechanism of the dihydrofolate reductase reaction as determined by pH studies.

S R Stone, J F Morrison.   

Abstract

The variation with pH of the kinetic parameters of the reaction catalyzed by dihydrofolate reductase from Escherichia coli has been determined with the aim of elucidating the chemical mechanism of the reaction. The (V/K)DHF and V profiles indicated that protonation enhances the observed rate of interaction of dihydrofolate (DHF) with the enzyme-NADPH complex as well as the maximum velocity of the reaction. The pKa value of 8.09 observed in the (V/K)DHF profile is similar to that of 7.9 observed in the Ki profile for 2,4-diamino-6,7-dimethylpteridine while the pKa value of the V profile is displaced to 8.4. From the magnitude of the pH-independent value for (V/K)DHF, it is concluded that unprotonated dihydrofolate must react, at neutral pH, with the protonated form of the enzyme. The D(V/K)DHF value is independent of pH and equal to unity whereas the DV value varies as a wave function of pH with limiting values of 1.5 and 1.0 at low and high pH, respectively. It is proposed that dihydrofolate reacts with the unprotonated enzyme-NADPH complex to form a dead-end complex and with the protonated form of the same complex to form a productive complex. Further, it is considered that the protonated carboxyl of Asp-27 at the active site of the enzyme is responsible for the protonation of the N-5 nitrogen of dihydrofolate and that this protonation precedes and facilitates hydride transfer.

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Year:  1984        PMID: 6380573     DOI: 10.1021/bi00307a034

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  pH-dependent conformational changes in Escherichia coli dihydrofolate reductase revealed by Raman difference spectroscopy.

Authors:  Y Q Chen; J Kraut; R Callender
Journal:  Biophys J       Date:  1997-02       Impact factor: 4.033

2.  Halophilic mechanism of the enzymatic function of a moderately halophilic dihydrofolate reductase from Haloarcula japonica strain TR-1.

Authors:  Yurina Miyashita; Eiji Ohmae; Teikichi Ikura; Kaoru Nakasone; Katsuo Katayanagi
Journal:  Extremophiles       Date:  2017-03-27       Impact factor: 2.395

3.  Importance of a hydrophobic residue in binding and catalysis by dihydrofolate reductase.

Authors:  R J Mayer; J T Chen; K Taira; C A Fierke; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  1986-10       Impact factor: 11.205

4.  Cloning and nucleotide sequence of a negative regulator gene for Klebsiella aerogenes arylsulfatase synthesis and identification of the gene as folA.

Authors:  H Azakami; H Sugino; Y Murooka
Journal:  J Bacteriol       Date:  1992-04       Impact factor: 3.490

5.  Amplification of protein expression in a cell free system.

Authors:  E Resto; A Iida; M D Van Cleve; S M Hecht
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

6.  Expression, purification, and inhibition profile of dihydrofolate reductase from the filarial nematode Wuchereria bancrofti.

Authors:  Andrew M Tobias; Dea Toska; Keith Lange; Tyler Eck; Rohit Bhat; Cheryl A Janson; David P Rotella; Ueli Gubler; Nina M Goodey
Journal:  PLoS One       Date:  2018-05-22       Impact factor: 3.240

7.  Loss of Hyperconjugative Effects Drives Hydride Transfer during Dihydrofolate Reductase Catalysis.

Authors:  Antonio Angelastro; J Javier Ruiz-Pernía; Iñaki Tuñón; Vicent Moliner; Louis Y P Luk; Rudolf K Allemann
Journal:  ACS Catal       Date:  2019-09-23       Impact factor: 13.084

  7 in total

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