Literature DB >> 6361271

The protein burden of lac operon products.

A L Koch.   

Abstract

A new approach to measuring the slowing of growth due to the manufacture of proteins not needed by a bacterium is presented. An entire single colony of Escherichia coli was used to start a chemostat culture that was then given a selective pressure by the addition of phenylgalactoside (phi-gal). This enriched the population for constitutive mutants that produced beta-galactosidase without induction and could split phi-gal, consume the galactose, and grow faster. When the phi-gal was removed, the constitutives grew slower than the parental strain and were gradually lost. This procedure allows competition experiments to be carried out with minimum effects due to genetic drift. Experiments with both strains having wild-type and mutant permease genes were conducted. With the former the selective disadvantage was initially much greater than expected from the simplest hypothesis that extra unused proteins would slow growth in proportion to their fraction of the total protein synthesis. This phase was followed by a second phase where the selective disadvantage was smaller than predicted by this simple hypothesis. With a very slowly reverting permease negative strain the selective disadvantage, and therefore the protein burden, was found to be much smaller and not statistically different from zero. Thus, while one would expect under carbon and energy limitation in the chemostat the protein burden to be larger than under unlimited conditions, it is so small that even the refined technique used here could not measure it accurately. It is certainly less than the fraction of 'waste' protein synthesis; but it could be between zero and the fraction of the cells' energy and carbon budget spent on manufacture of the proteins of the lac operon.

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Year:  1983        PMID: 6361271     DOI: 10.1007/bf02102321

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  17 in total

1.  SELECTION FOR TRYPTOPHAN AUXOTROPHS OF ESCHERICHIA COLI IN GLUCOSE-LIMITED CHEMOSTATS AS A TEST OF THE ENERGY CONSERVATION HYPOTHESIS OF EVOLUTION.

Authors:  Daniel Dykhuizen
Journal:  Evolution       Date:  1978-03       Impact factor: 3.694

2.  Effect of growth rate on the relative rates of synthesis of messenger, ribosomal and transfer RNA in Escherichia coli.

Authors:  T E Norris; A L Koch
Journal:  J Mol Biol       Date:  1972-03-14       Impact factor: 5.469

3.  The nature of lactose operator constitive mutations.

Authors:  T F Smith; J R Sadler
Journal:  J Mol Biol       Date:  1971-07-28       Impact factor: 5.469

4.  Protein degradation in Escherichia coli. I. Measurement of rapidly and slowly decaying components.

Authors:  K Nath; A L Koch
Journal:  J Biol Chem       Date:  1970-06-10       Impact factor: 5.157

5.  How bacteria face depression, recession, and depression.

Authors:  A L Koch
Journal:  Perspect Biol Med       Date:  1976       Impact factor: 1.416

6.  Selective disadvantage of non-functional protein synthesis in Escherichia coli.

Authors:  K J Andrews; G D Hegeman
Journal:  J Mol Evol       Date:  1976-12-30       Impact factor: 2.395

Review 7.  Evolution of antibiotic resistance gene function.

Authors:  A L Koch
Journal:  Microbiol Rev       Date:  1981-06

8.  Thermodynamic efficiency of microbial growth is low but optimal for maximal growth rate.

Authors:  H V Westerhoff; K J Hellingwerf; K Van Dam
Journal:  Proc Natl Acad Sci U S A       Date:  1983-01       Impact factor: 11.205

9.  Transport by the lactose permease of Escherichia coli as the basis of lactose killing.

Authors:  D Dykhuizen; D Hartl
Journal:  J Bacteriol       Date:  1978-09       Impact factor: 3.490

10.  Temperature-sensitive mutants of Escherichia coli affecting beta-galactoside transport.

Authors:  M Crandall; A L Koch
Journal:  J Bacteriol       Date:  1971-02       Impact factor: 3.490

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  38 in total

1.  The evolutionary selection of DNA base pairs in gene-regulatory binding sites.

Authors:  O G Berg
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

2.  Physical limits on cooperative protein-DNA binding and the kinetics of combinatorial transcription regulation.

Authors:  Nico Geisel; Ulrich Gerland
Journal:  Biophys J       Date:  2011-10-05       Impact factor: 4.033

3.  Selection in a cyclical environment: possible impact of phenotypic lag on Darwinian fitness.

Authors:  Amy M Suiter; Antony M Dean
Journal:  J Mol Evol       Date:  2005-08-02       Impact factor: 2.395

4.  On the origins of a crowded cytoplasm.

Authors:  Luis Acerenza; Martin Graña
Journal:  J Mol Evol       Date:  2006-09-26       Impact factor: 2.395

5.  Noisy information processing through transcriptional regulation.

Authors:  Eric Libby; Theodore J Perkins; Peter S Swain
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-09       Impact factor: 11.205

Review 6.  Growth rate of Escherichia coli.

Authors:  A G Marr
Journal:  Microbiol Rev       Date:  1991-06

7.  Nonlinear fitness landscape of a molecular pathway.

Authors:  Lilia Perfeito; Stéphane Ghozzi; Johannes Berg; Karin Schnetz; Michael Lässig
Journal:  PLoS Genet       Date:  2011-07-21       Impact factor: 5.917

8.  In silico evolved lac operons exhibit bistability for artificial inducers, but not for lactose.

Authors:  M J A van Hoek; P Hogeweg
Journal:  Biophys J       Date:  2006-07-28       Impact factor: 4.033

9.  Effects of pyruvate decarboxylase overproduction on flux distribution at the pyruvate branch point in Saccharomyces cerevisiae.

Authors:  P van Hoek; M T Flikweert; Q J van der Aart; H Y Steensma; J P van Dijken; J T Pronk
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

10.  The cost of gene expression underlies a fitness trade-off in yeast.

Authors:  Gregory I Lang; Andrew W Murray; David Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-19       Impact factor: 11.205

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