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Literature DB >> 6359060

DNA sequence of the 16S rRNA/23S rRNA intercistronic spacer of two rDNA operons of the archaebacterium Methanococcus vannielii.

Abstract

The DNA sequence of the spacer (plus flanking) regions separating the 16S rRNA and 23S rRNA genes of two presumptive rDNA operons of the archaebacterium Methanococcus vannielii was determined. The spacers are 156 and 242 base pairs in size and they share a sequence homology of 49 base pairs following the 3' terminus of the 16S rRNA gene and of about 60 base pairs preceding the 5' end of the 23S rRNA gene. The 242 base pair spacer, in addition contains a sequence which can be transcribed into tRNAAla, whereas no tRNA-like secondary structure can be delineated from the 156 base pair spacer region. Almost complete sequence homology was detected between the end of the 16S rRNA gene and the 3' termini of either Escherichia coli or Halobacterium halobium 16S rRNA, whereas the putative 5' terminal 23S rRNA sequence shared partial homology with E. coli 23S rRNA and eukaryotic 5.8S rRNA.

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Year: 1983 PMID： 6359060 PMCID： PMC326500 DOI： 10.1093/nar/11.21.7537

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

22 in total

1. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

Authors: A C Chang; S N Cohen
Journal: J Bacteriol Date: 1978-06 Impact factor: 3.490

2. Structure of the orgin of DNA replication of bacteriophage fd.

Authors: C P Gray; R Sommer; C Polke; E Beck; H Schaller
Journal: Proc Natl Acad Sci U S A Date: 1978-01 Impact factor: 11.205

3. Sequence of the 16 S-23 s spacer region in two ribosomal RNA operons of Escherichia coli.

Authors: R A Young; R Macklis; J A Steitz
Journal: J Biol Chem Date: 1979-05-10 Impact factor: 5.157

Review 4. Methanogens: reevaluation of a unique biological group.

Authors: W E Balch; G E Fox; L J Magrum; C R Woese; R S Wolfe
Journal: Microbiol Rev Date: 1979-06

5. Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.

Authors: D B Clewell; D R Helinski
Journal: Proc Natl Acad Sci U S A Date: 1969-04 Impact factor: 11.205

6. Sequencing of 16S--23S spacer in a ribosomal RNA operon of Euglena gracilis chloroplast DNA reveals two tRNA genes.

Authors: L Graf; H Kössel; E Stutz
Journal: Nature Date: 1980-08-28 Impact factor: 49.962

7. Isolation from rat liver and sequence of a RNA fragment containing 32 nucleotides from position 5 to 36 from the 3' end of ribosomal 18S RNA.

Authors: H Alberty; M Raba; H J Gross
Journal: Nucleic Acids Res Date: 1978-02 Impact factor: 16.971

8. Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors: A M Maxam; W Gilbert
Journal: Methods Enzymol Date: 1980 Impact factor: 1.600

9. Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA.

Authors: S N Cohen; A C Chang; L Hsu
Journal: Proc Natl Acad Sci U S A Date: 1972-08 Impact factor: 11.205

10. The number, physical organization and transcription of ribosomal RNA cistrons in an archaebacterium: Halobacterium halobium.

Authors: J D Hofman; R H Lau; W F Doolittle
Journal: Nucleic Acids Res Date: 1979-11-10 Impact factor: 16.971

10 in total

7. Conservation of primary structure in the hisI gene of the archaebacterium, Methanococcus vannielii, the eubacterium Escherichia coli, and the eucaryote Saccharomyces cerevisiae.

Authors: G S Beckler; J N Reeve
Journal: Mol Gen Genet Date: 1986-07

DNA sequence of the 16S rRNA/23S rRNA intercistronic spacer of two rDNA operons of the archaebacterium Methanococcus vannielii.

1. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

2. Structure of the orgin of DNA replication of bacteriophage fd.

3. Sequence of the 16 S-23 s spacer region in two ribosomal RNA operons of Escherichia coli.

Review 4. Methanogens: reevaluation of a unique biological group.

5. Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.

6. Sequencing of 16S--23S spacer in a ribosomal RNA operon of Euglena gracilis chloroplast DNA reveals two tRNA genes.

7. Isolation from rat liver and sequence of a RNA fragment containing 32 nucleotides from position 5 to 36 from the 3' end of ribosomal 18S RNA.

8. Sequencing end-labeled DNA with base-specific chemical cleavages.

9. Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA.

10. The number, physical organization and transcription of ribosomal RNA cistrons in an archaebacterium: Halobacterium halobium.

1. Novel tRNA gene organization in the 16S-23S intergenic spacer of the Streptococcus pneumoniae rRNA gene cluster.

2. TTG serves as an initiation codon for the ribosomal protein MvaS7 from the archaeon Methanococcus vannielii.

Review 3. Methanogens and the diversity of archaebacteria.

4. On the evolution of ribosomal RNA.

5. Isolation and characterization of the rRNA gene clusters of Halobacterium marismortui.

6. Polyadenylated, noncapped RNA from the archaebacterium Methanococcus vannielii.

7. Conservation of primary structure in the hisI gene of the archaebacterium, Methanococcus vannielii, the eubacterium Escherichia coli, and the eucaryote Saccharomyces cerevisiae.

8. Sequence of 5S ribosomal RNA gene regions and their products in the archaebacterium Halobacterium volcanii.

9. Apparent operon for a 5S ribosomal RNA gene and for tRNA genes in the archaebacterium Methanococcus vannielii.

10. Non-repetitive AT-rich sequences are found in intergenic regions of Methanococcus voltae DNA.