Literature DB >> 3118048

On the evolution of ribosomal RNA.

C G Clark1.   

Abstract

Despite the availability of a rapidly growing ribosomal RNA database that now includes organisms in all three primary lines of descent (eubacteria, archaebacteria, and eukaryotes), theoretical treatment of the evolution of the ribosomal RNAs has lagged behind that of the protein genes. In this paper a theory is developed that applies current views of protein gene evolution to the ribosomal RNAs. The major topics addressed are the variability in size, gene arrangement, and processing of the rRNAs among the three primary lines of descent. Among the conclusions are that the rRNAs of eukaryotes retain some primitive features that were probably present in the rRNAs of the earliest cell (the progenote) and that the genes coding for the three major rRNA species were probably originally unlinked.

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Year:  1987        PMID: 3118048     DOI: 10.1007/bf02603119

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  38 in total

1.  Speculations on the early course of evolution.

Authors:  J E Darnell; W F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

2.  Unusual organization and lack of recombination in the ribosomal RNA genes of Coprinus cinereus.

Authors:  J Rhodes Cassidy; D Moore; B C Lu; P J Pukkila
Journal:  Curr Genet       Date:  1984-10       Impact factor: 3.886

3.  On the antiquity of introns.

Authors:  W Gilbert; M Marchionni; G McKnight
Journal:  Cell       Date:  1986-07-18       Impact factor: 41.582

4.  Three small RNAs within the 10 kb trypanosome rRNA transcription unit are analogous to domain VII of other eukaryotic 28S rRNAs.

Authors:  T C White; G Rudenko; P Borst
Journal:  Nucleic Acids Res       Date:  1986-12-09       Impact factor: 16.971

5.  Precise identification of cleavage sites involved in the unusual processing of trypanosome ribosomal RNA.

Authors:  D A Campbell; K Kubo; C G Clark; J C Boothroyd
Journal:  J Mol Biol       Date:  1987-07-05       Impact factor: 5.469

6.  Xenopus laevis 28S ribosomal RNA: a secondary structure model and its evolutionary and functional implications.

Authors:  C G Clark; B W Tague; V C Ware; S A Gerbi
Journal:  Nucleic Acids Res       Date:  1984-08-10       Impact factor: 16.971

7.  Nucleotide sequence and evolution of the 18S ribosomal RNA gene in maize mitochondria.

Authors:  S Chao; R Sederoff; C S Levings
Journal:  Nucleic Acids Res       Date:  1984-08-24       Impact factor: 16.971

8.  Partial Sequence Analysis of the 5S to 18S rRNA Gene Region of the Maize Mitochondrial Genome.

Authors:  S Chao; R R Sederoff; C S Levings
Journal:  Plant Physiol       Date:  1983-01       Impact factor: 8.340

9.  Organization of rRNA structural genes in the archaebacterium Thermoplasma acidophilum.

Authors:  J Tu; W Zillig
Journal:  Nucleic Acids Res       Date:  1982-11-25       Impact factor: 16.971

10.  Sequence analysis of 28S ribosomal DNA from the amphibian Xenopus laevis.

Authors:  V C Ware; B W Tague; C G Clark; R L Gourse; R C Brand; S A Gerbi
Journal:  Nucleic Acids Res       Date:  1983-11-25       Impact factor: 16.971

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  29 in total

1.  Distribution of substitution rates and location of insertion sites in the tertiary structure of ribosomal RNA.

Authors:  J Wuyts; Y Van de Peer; R De Wachter
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

2.  Tracing the evolution of RNA structure in ribosomes.

Authors:  Gustavo Caetano-Anollés
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

3.  Novel processing in a mammalian nuclear 28S pre-rRNA: tissue-specific elimination of an 'intron' bearing a hidden break site.

Authors:  G J Melen; C G Pesce; M S Rossi; A R Kornblihtt
Journal:  EMBO J       Date:  1999-06-01       Impact factor: 11.598

4.  A possible tertiary rRNA interaction between expansion segments ES3 and ES6 in eukaryotic 40S ribosomal subunits.

Authors:  Gunnar Alkemar; Odd Nygård
Journal:  RNA       Date:  2003-01       Impact factor: 4.942

5.  Nucleotide sequence of a 5.8S rDNA gene and of the internal transcribed spacers from Populus deltoides.

Authors:  R D'Ovidio
Journal:  Plant Mol Biol       Date:  1992-09       Impact factor: 4.076

6.  Is higher-order structure conserved in eukaryotic ribosomal DNA intergenic spacers?

Authors:  G D Baldridge; M W Dalton; A M Fallon
Journal:  J Mol Evol       Date:  1992-12       Impact factor: 2.395

7.  Molecular phylogeny of some polychaete annelids: an initial approach to the Atlantic-Mediterranean speciation problem.

Authors:  G Lenaers; M Bhaud
Journal:  J Mol Evol       Date:  1992-11       Impact factor: 2.395

8.  'Compensatory slippage' in the evolution of ribosomal RNA genes.

Authors:  J M Hancock; G A Dover
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

Review 9.  Origin and evolution of the ribosome.

Authors:  George E Fox
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-09       Impact factor: 10.005

10.  Ribosome origins: the relative age of 23S rRNA Domains.

Authors:  James Hury; Uma Nagaswamy; Maia Larios-Sanz; George E Fox
Journal:  Orig Life Evol Biosph       Date:  2006-09-14       Impact factor: 1.950

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